RNA–Protein interactions for RNA: ENST00000432192.5

CLCN1-202, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 491 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-202ENST00000432192 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
CLCN1-202ENST00000432192 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
CLCN1-202ENST00000432192 ABCC9O60706 1549 aa31.24■■■□□ 2.59
CLCN1-202ENST00000432192 RB1CC1Q8TDY2 1594 aa30.05■■■□□ 2.4
CLCN1-202ENST00000432192 NACADO15069 1562 aa29.92■■■□□ 2.38
CLCN1-202ENST00000432192 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.35
CLCN1-202ENST00000432192 MYO15BQ96JP2 1530 aa29.63■■■□□ 2.33
CLCN1-202ENST00000432192 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
CLCN1-202ENST00000432192 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
CLCN1-202ENST00000432192 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.3
CLCN1-202ENST00000432192 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
CLCN1-202ENST00000432192 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
CLCN1-202ENST00000432192 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
CLCN1-202ENST00000432192 SHROOM4Q9ULL8 1493 aa28.82■■■□□ 2.2
CLCN1-202ENST00000432192 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
CLCN1-202ENST00000432192 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
CLCN1-202ENST00000432192 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
CLCN1-202ENST00000432192 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
CLCN1-202ENST00000432192 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
CLCN1-202ENST00000432192 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
CLCN1-202ENST00000432192 SMARCA2P51531 1590 aa27.57■■■□□ 2
CLCN1-202ENST00000432192 NCAPD3P42695 1498 aa27.51■■■□□ 2
CLCN1-202ENST00000432192 ATAD2BQ9ULI0 1458 aa27.51■■■□□ 2
CLCN1-202ENST00000432192 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
CLCN1-202ENST00000432192 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
CLCN1-202ENST00000432192 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
CLCN1-202ENST00000432192 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
CLCN1-202ENST00000432192 WIZO95785 1651 aa27.12■■□□□ 1.93
CLCN1-202ENST00000432192 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
CLCN1-202ENST00000432192 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
CLCN1-202ENST00000432192 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
CLCN1-202ENST00000432192 NESP48681 1621 aa26.94■■□□□ 1.9
CLCN1-202ENST00000432192 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
CLCN1-202ENST00000432192 CUX2O14529 1486 aa26.8■■□□□ 1.88
CLCN1-202ENST00000432192 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
CLCN1-202ENST00000432192 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
CLCN1-202ENST00000432192 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
CLCN1-202ENST00000432192 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
CLCN1-202ENST00000432192 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
CLCN1-202ENST00000432192 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
CLCN1-202ENST00000432192 CFTRP13569 1480 aa26.52■■□□□ 1.84
CLCN1-202ENST00000432192 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
CLCN1-202ENST00000432192 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
CLCN1-202ENST00000432192 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
CLCN1-202ENST00000432192 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
CLCN1-202ENST00000432192 WDR62O43379 1518 aa26.4■■□□□ 1.82
CLCN1-202ENST00000432192 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
CLCN1-202ENST00000432192 DNAJC5Q9H3Z4 198 aa26.09■■□□□ 1.77
CLCN1-202ENST00000432192 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
CLCN1-202ENST00000432192 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
CLCN1-202ENST00000432192 TOPBP1Q92547 1522 aa26■■□□□ 1.75
CLCN1-202ENST00000432192 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
CLCN1-202ENST00000432192 EIF4G3O43432 1585 aaKnown RBP25.77■■□□□ 1.72
CLCN1-202ENST00000432192 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
CLCN1-202ENST00000432192 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
CLCN1-202ENST00000432192 ZNF608Q9ULD9 1512 aaPredicted RBP25.75■■□□□ 1.71
CLCN1-202ENST00000432192 CUX1P39880 1505 aa25.7■■□□□ 1.7
CLCN1-202ENST00000432192 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
CLCN1-202ENST00000432192 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
CLCN1-202ENST00000432192 SOGA1O94964 1423 aa25.63■■□□□ 1.69
CLCN1-202ENST00000432192 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
CLCN1-202ENST00000432192 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.68
CLCN1-202ENST00000432192 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
CLCN1-202ENST00000432192 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CLCN1-202ENST00000432192 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
CLCN1-202ENST00000432192 CHD1O14646 1710 aa25.51■■□□□ 1.68
CLCN1-202ENST00000432192 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
CLCN1-202ENST00000432192 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
CLCN1-202ENST00000432192 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
CLCN1-202ENST00000432192 PBRM1Q86U86 1689 aa25.45■■□□□ 1.67
CLCN1-202ENST00000432192 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
CLCN1-202ENST00000432192 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
CLCN1-202ENST00000432192 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
CLCN1-202ENST00000432192 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
CLCN1-202ENST00000432192 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
CLCN1-202ENST00000432192 GAPVD1Q14C86 1478 aa25.36■■□□□ 1.65
CLCN1-202ENST00000432192 FBLN2P98095 1184 aa25.36■■□□□ 1.65
CLCN1-202ENST00000432192 RIMBP3CA6NJZ7 1639 aa25.27■■□□□ 1.64
CLCN1-202ENST00000432192 RIMBP3BA6NNM3 1639 aa25.27■■□□□ 1.64
CLCN1-202ENST00000432192 RIMBP3Q9UFD9 1639 aa25.27■■□□□ 1.64
CLCN1-202ENST00000432192 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
CLCN1-202ENST00000432192 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
CLCN1-202ENST00000432192 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
CLCN1-202ENST00000432192 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
CLCN1-202ENST00000432192 ADAMTS12P58397 1594 aa25.17■■□□□ 1.62
CLCN1-202ENST00000432192 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
CLCN1-202ENST00000432192 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
CLCN1-202ENST00000432192 GRIN2AQ12879 1464 aa25.08■■□□□ 1.6
CLCN1-202ENST00000432192 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
CLCN1-202ENST00000432192 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
CLCN1-202ENST00000432192 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
CLCN1-202ENST00000432192 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
CLCN1-202ENST00000432192 CUL7Q14999 1698 aa24.95■■□□□ 1.58
CLCN1-202ENST00000432192 NUP160Q12769 1436 aa24.93■■□□□ 1.58
CLCN1-202ENST00000432192 IGF1RP08069 1367 aa24.92■■□□□ 1.58
CLCN1-202ENST00000432192 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
CLCN1-202ENST00000432192 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
CLCN1-202ENST00000432192 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
CLCN1-202ENST00000432192 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
CLCN1-202ENST00000432192 CARMIL1Q5VZK9 1371 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms