RNA–Protein interactions for RNA: ENST00000432040.1

LRRC3B-204, Transcript of leucine rich repeat containing 3B, humanhuman

TSL 3

Gene LRRC3B, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-204ENST00000432040 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
LRRC3B-204ENST00000432040 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
LRRC3B-204ENST00000432040 ABCC9O60706 1549 aa30.39■■■□□ 2.46
LRRC3B-204ENST00000432040 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
LRRC3B-204ENST00000432040 NACADO15069 1562 aa29.25■■■□□ 2.27
LRRC3B-204ENST00000432040 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
LRRC3B-204ENST00000432040 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
LRRC3B-204ENST00000432040 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
LRRC3B-204ENST00000432040 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
LRRC3B-204ENST00000432040 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
LRRC3B-204ENST00000432040 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
LRRC3B-204ENST00000432040 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
LRRC3B-204ENST00000432040 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
LRRC3B-204ENST00000432040 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
LRRC3B-204ENST00000432040 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
LRRC3B-204ENST00000432040 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
LRRC3B-204ENST00000432040 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
LRRC3B-204ENST00000432040 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
LRRC3B-204ENST00000432040 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
LRRC3B-204ENST00000432040 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
LRRC3B-204ENST00000432040 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
LRRC3B-204ENST00000432040 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
LRRC3B-204ENST00000432040 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
LRRC3B-204ENST00000432040 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
LRRC3B-204ENST00000432040 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
LRRC3B-204ENST00000432040 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
LRRC3B-204ENST00000432040 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
LRRC3B-204ENST00000432040 WIZO95785 1651 aa26.5■■□□□ 1.83
LRRC3B-204ENST00000432040 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
LRRC3B-204ENST00000432040 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
LRRC3B-204ENST00000432040 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
LRRC3B-204ENST00000432040 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
LRRC3B-204ENST00000432040 NESP48681 1621 aa26.25■■□□□ 1.79
LRRC3B-204ENST00000432040 CADPSQ9ULU8 1353 aa26.14■■□□□ 1.78
LRRC3B-204ENST00000432040 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
LRRC3B-204ENST00000432040 CUX2O14529 1486 aa26.09■■□□□ 1.77
LRRC3B-204ENST00000432040 KIF21AQ7Z4S6 1674 aa26■■□□□ 1.75
LRRC3B-204ENST00000432040 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
LRRC3B-204ENST00000432040 CFTRP13569 1480 aa25.98■■□□□ 1.75
LRRC3B-204ENST00000432040 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
LRRC3B-204ENST00000432040 CCDC88BA6NC98 1476 aa25.92■■□□□ 1.74
LRRC3B-204ENST00000432040 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
LRRC3B-204ENST00000432040 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
LRRC3B-204ENST00000432040 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
LRRC3B-204ENST00000432040 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
LRRC3B-204ENST00000432040 WDR62O43379 1518 aa25.78■■□□□ 1.72
LRRC3B-204ENST00000432040 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
LRRC3B-204ENST00000432040 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
LRRC3B-204ENST00000432040 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
LRRC3B-204ENST00000432040 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
LRRC3B-204ENST00000432040 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
LRRC3B-204ENST00000432040 DNAJC5Q9H3Z4 198 aa25.27■■□□□ 1.64
LRRC3B-204ENST00000432040 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
LRRC3B-204ENST00000432040 CUX1P39880 1505 aa25.17■■□□□ 1.62
LRRC3B-204ENST00000432040 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
LRRC3B-204ENST00000432040 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
LRRC3B-204ENST00000432040 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
LRRC3B-204ENST00000432040 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
LRRC3B-204ENST00000432040 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
LRRC3B-204ENST00000432040 SOGA1O94964 1423 aa25.06■■□□□ 1.6
LRRC3B-204ENST00000432040 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
LRRC3B-204ENST00000432040 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
LRRC3B-204ENST00000432040 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
LRRC3B-204ENST00000432040 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
LRRC3B-204ENST00000432040 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
LRRC3B-204ENST00000432040 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
LRRC3B-204ENST00000432040 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
LRRC3B-204ENST00000432040 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
LRRC3B-204ENST00000432040 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
LRRC3B-204ENST00000432040 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
LRRC3B-204ENST00000432040 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
LRRC3B-204ENST00000432040 MAGI1Q96QZ7 1491 aaPredicted RBP24.82■■□□□ 1.56
LRRC3B-204ENST00000432040 GAPVD1Q14C86 1478 aa24.8■■□□□ 1.56
LRRC3B-204ENST00000432040 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
LRRC3B-204ENST00000432040 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
LRRC3B-204ENST00000432040 CHD1O14646 1710 aa24.78■■□□□ 1.56
LRRC3B-204ENST00000432040 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
LRRC3B-204ENST00000432040 FBLN2P98095 1184 aa24.66■■□□□ 1.54
LRRC3B-204ENST00000432040 ERICH3Q5RHP9 1530 aa24.63■■□□□ 1.53
LRRC3B-204ENST00000432040 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
LRRC3B-204ENST00000432040 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
LRRC3B-204ENST00000432040 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
LRRC3B-204ENST00000432040 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 FHAD1B1AJZ9 1412 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
LRRC3B-204ENST00000432040 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
LRRC3B-204ENST00000432040 GRIN2AQ12879 1464 aa24.52■■□□□ 1.52
LRRC3B-204ENST00000432040 CUL7Q14999 1698 aa24.41■■□□□ 1.5
LRRC3B-204ENST00000432040 NUP160Q12769 1436 aa24.41■■□□□ 1.5
LRRC3B-204ENST00000432040 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
LRRC3B-204ENST00000432040 IGF1RP08069 1367 aa24.36■■□□□ 1.49
LRRC3B-204ENST00000432040 ARAP1Q96P48 1450 aa24.31■■□□□ 1.48
LRRC3B-204ENST00000432040 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
LRRC3B-204ENST00000432040 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
LRRC3B-204ENST00000432040 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
LRRC3B-204ENST00000432040 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
LRRC3B-204ENST00000432040 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms