RNA–Protein interactions for RNA: ENST00000431164.1

SH3KBP1-206, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 3

Gene SH3KBP1, Length 518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-206ENST00000431164 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
SH3KBP1-206ENST00000431164 ABCC9O60706 1549 aa24.35■■□□□ 1.49
SH3KBP1-206ENST00000431164 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
SH3KBP1-206ENST00000431164 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
SH3KBP1-206ENST00000431164 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
SH3KBP1-206ENST00000431164 NACADO15069 1562 aa22.85■■□□□ 1.25
SH3KBP1-206ENST00000431164 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
SH3KBP1-206ENST00000431164 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
SH3KBP1-206ENST00000431164 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
SH3KBP1-206ENST00000431164 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
SH3KBP1-206ENST00000431164 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
SH3KBP1-206ENST00000431164 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
SH3KBP1-206ENST00000431164 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
SH3KBP1-206ENST00000431164 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
SH3KBP1-206ENST00000431164 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
SH3KBP1-206ENST00000431164 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
SH3KBP1-206ENST00000431164 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
SH3KBP1-206ENST00000431164 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
SH3KBP1-206ENST00000431164 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
SH3KBP1-206ENST00000431164 CUX2O14529 1486 aa21.17■□□□□ 0.98
SH3KBP1-206ENST00000431164 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
SH3KBP1-206ENST00000431164 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SH3KBP1-206ENST00000431164 ERCC6Q03468 1493 aa21■□□□□ 0.95
SH3KBP1-206ENST00000431164 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
SH3KBP1-206ENST00000431164 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
SH3KBP1-206ENST00000431164 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
SH3KBP1-206ENST00000431164 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
SH3KBP1-206ENST00000431164 NESP48681 1621 aa20.87■□□□□ 0.93
SH3KBP1-206ENST00000431164 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
SH3KBP1-206ENST00000431164 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
SH3KBP1-206ENST00000431164 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
SH3KBP1-206ENST00000431164 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
SH3KBP1-206ENST00000431164 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
SH3KBP1-206ENST00000431164 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
SH3KBP1-206ENST00000431164 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
SH3KBP1-206ENST00000431164 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SH3KBP1-206ENST00000431164 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
SH3KBP1-206ENST00000431164 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
SH3KBP1-206ENST00000431164 WDR62O43379 1518 aa20.38■□□□□ 0.85
SH3KBP1-206ENST00000431164 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
SH3KBP1-206ENST00000431164 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
SH3KBP1-206ENST00000431164 WIZO95785 1651 aa20.29■□□□□ 0.84
SH3KBP1-206ENST00000431164 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
SH3KBP1-206ENST00000431164 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
SH3KBP1-206ENST00000431164 CFTRP13569 1480 aa20.16■□□□□ 0.82
SH3KBP1-206ENST00000431164 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
SH3KBP1-206ENST00000431164 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
SH3KBP1-206ENST00000431164 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
SH3KBP1-206ENST00000431164 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
SH3KBP1-206ENST00000431164 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
SH3KBP1-206ENST00000431164 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
SH3KBP1-206ENST00000431164 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
SH3KBP1-206ENST00000431164 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
SH3KBP1-206ENST00000431164 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
SH3KBP1-206ENST00000431164 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
SH3KBP1-206ENST00000431164 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
SH3KBP1-206ENST00000431164 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
SH3KBP1-206ENST00000431164 TOPBP1Q92547 1522 aa19.77■□□□□ 0.76
SH3KBP1-206ENST00000431164 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
SH3KBP1-206ENST00000431164 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
SH3KBP1-206ENST00000431164 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
SH3KBP1-206ENST00000431164 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
SH3KBP1-206ENST00000431164 CHD1O14646 1710 aa19.65■□□□□ 0.74
SH3KBP1-206ENST00000431164 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
SH3KBP1-206ENST00000431164 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
SH3KBP1-206ENST00000431164 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
SH3KBP1-206ENST00000431164 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SH3KBP1-206ENST00000431164 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
SH3KBP1-206ENST00000431164 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
SH3KBP1-206ENST00000431164 FBLN2P98095 1184 aa19.46■□□□□ 0.71
SH3KBP1-206ENST00000431164 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
SH3KBP1-206ENST00000431164 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
SH3KBP1-206ENST00000431164 SOGA1O94964 1423 aa19.43■□□□□ 0.7
SH3KBP1-206ENST00000431164 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SH3KBP1-206ENST00000431164 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
SH3KBP1-206ENST00000431164 FGD5Q6ZNL6 1462 aa19.36■□□□□ 0.69
SH3KBP1-206ENST00000431164 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
SH3KBP1-206ENST00000431164 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
SH3KBP1-206ENST00000431164 CUX1P39880 1505 aa19.33■□□□□ 0.68
SH3KBP1-206ENST00000431164 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
SH3KBP1-206ENST00000431164 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
SH3KBP1-206ENST00000431164 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
SH3KBP1-206ENST00000431164 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
SH3KBP1-206ENST00000431164 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
SH3KBP1-206ENST00000431164 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
SH3KBP1-206ENST00000431164 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
SH3KBP1-206ENST00000431164 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
SH3KBP1-206ENST00000431164 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
SH3KBP1-206ENST00000431164 NUP160Q12769 1436 aa19.06■□□□□ 0.64
SH3KBP1-206ENST00000431164 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
SH3KBP1-206ENST00000431164 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
SH3KBP1-206ENST00000431164 ADAMTS12P58397 1594 aa19.02■□□□□ 0.63
SH3KBP1-206ENST00000431164 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
SH3KBP1-206ENST00000431164 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
SH3KBP1-206ENST00000431164 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
SH3KBP1-206ENST00000431164 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
SH3KBP1-206ENST00000431164 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
SH3KBP1-206ENST00000431164 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
SH3KBP1-206ENST00000431164 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
SH3KBP1-206ENST00000431164 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms