RNA–Protein interactions for RNA: ENST00000430231.1

AL049542.1-201, humanhuman

BASIC

Gene AL049542.1, Length 278 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049542.1-201ENST00000430231 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
AL049542.1-201ENST00000430231 ABCC9O60706 1549 aa26.98■■□□□ 1.91
AL049542.1-201ENST00000430231 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
AL049542.1-201ENST00000430231 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
AL049542.1-201ENST00000430231 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
AL049542.1-201ENST00000430231 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
AL049542.1-201ENST00000430231 NACADO15069 1562 aa24.8■■□□□ 1.56
AL049542.1-201ENST00000430231 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
AL049542.1-201ENST00000430231 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
AL049542.1-201ENST00000430231 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
AL049542.1-201ENST00000430231 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
AL049542.1-201ENST00000430231 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
AL049542.1-201ENST00000430231 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
AL049542.1-201ENST00000430231 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
AL049542.1-201ENST00000430231 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
AL049542.1-201ENST00000430231 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
AL049542.1-201ENST00000430231 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
AL049542.1-201ENST00000430231 ZCCHC6Q5VYS8 1495 aaKnown RBP23.57■■□□□ 1.36
AL049542.1-201ENST00000430231 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
AL049542.1-201ENST00000430231 CUX2O14529 1486 aa23.47■■□□□ 1.35
AL049542.1-201ENST00000430231 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
AL049542.1-201ENST00000430231 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
AL049542.1-201ENST00000430231 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
AL049542.1-201ENST00000430231 NESP48681 1621 aa22.95■■□□□ 1.26
AL049542.1-201ENST00000430231 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
AL049542.1-201ENST00000430231 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
AL049542.1-201ENST00000430231 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
AL049542.1-201ENST00000430231 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
AL049542.1-201ENST00000430231 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
AL049542.1-201ENST00000430231 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
AL049542.1-201ENST00000430231 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
AL049542.1-201ENST00000430231 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
AL049542.1-201ENST00000430231 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
AL049542.1-201ENST00000430231 BAZ1AQ9NRL2 1556 aaPredicted RBP22.35■■□□□ 1.17
AL049542.1-201ENST00000430231 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
AL049542.1-201ENST00000430231 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
AL049542.1-201ENST00000430231 WDR62O43379 1518 aa22.27■■□□□ 1.16
AL049542.1-201ENST00000430231 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
AL049542.1-201ENST00000430231 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
AL049542.1-201ENST00000430231 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
AL049542.1-201ENST00000430231 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
AL049542.1-201ENST00000430231 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
AL049542.1-201ENST00000430231 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
AL049542.1-201ENST00000430231 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.12
AL049542.1-201ENST00000430231 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
AL049542.1-201ENST00000430231 TRHP20396 242 aaPredicted RBP21.99■■□□□ 1.11
AL049542.1-201ENST00000430231 CYB5RLQ6IPT4 315 aa21.96■■□□□ 1.11
AL049542.1-201ENST00000430231 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
AL049542.1-201ENST00000430231 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
AL049542.1-201ENST00000430231 URB2Q14146 1524 aaKnown RBP21.89■■□□□ 1.09
AL049542.1-201ENST00000430231 WIZO95785 1651 aa21.81■■□□□ 1.08
AL049542.1-201ENST00000430231 CFTRP13569 1480 aa21.8■■□□□ 1.08
AL049542.1-201ENST00000430231 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
AL049542.1-201ENST00000430231 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
AL049542.1-201ENST00000430231 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
AL049542.1-201ENST00000430231 FBLN2P98095 1184 aa21.58■■□□□ 1.05
AL049542.1-201ENST00000430231 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
AL049542.1-201ENST00000430231 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
AL049542.1-201ENST00000430231 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
AL049542.1-201ENST00000430231 CHD1O14646 1710 aa21.49■■□□□ 1.03
AL049542.1-201ENST00000430231 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
AL049542.1-201ENST00000430231 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
AL049542.1-201ENST00000430231 PRDM2Q13029 1718 aa21.34■■□□□ 1.01
AL049542.1-201ENST00000430231 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
AL049542.1-201ENST00000430231 ABCC8Q09428 1581 aa21.3■■□□□ 1
AL049542.1-201ENST00000430231 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
AL049542.1-201ENST00000430231 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
AL049542.1-201ENST00000430231 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
AL049542.1-201ENST00000430231 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
AL049542.1-201ENST00000430231 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
AL049542.1-201ENST00000430231 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
AL049542.1-201ENST00000430231 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
AL049542.1-201ENST00000430231 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
AL049542.1-201ENST00000430231 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
AL049542.1-201ENST00000430231 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
AL049542.1-201ENST00000430231 SOGA1O94964 1423 aa21.14■□□□□ 0.98
AL049542.1-201ENST00000430231 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
AL049542.1-201ENST00000430231 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
AL049542.1-201ENST00000430231 SYNJ2O15056 1496 aa21.02■□□□□ 0.96
AL049542.1-201ENST00000430231 GRIN2BQ13224 1484 aa21■□□□□ 0.95
AL049542.1-201ENST00000430231 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
AL049542.1-201ENST00000430231 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
AL049542.1-201ENST00000430231 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
AL049542.1-201ENST00000430231 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
AL049542.1-201ENST00000430231 CUX1P39880 1505 aa20.83■□□□□ 0.93
AL049542.1-201ENST00000430231 KIF13AQ9H1H9 1805 aa20.8■□□□□ 0.92
AL049542.1-201ENST00000430231 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
AL049542.1-201ENST00000430231 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
AL049542.1-201ENST00000430231 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
AL049542.1-201ENST00000430231 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
AL049542.1-201ENST00000430231 NUP160Q12769 1436 aa20.69■□□□□ 0.9
AL049542.1-201ENST00000430231 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
AL049542.1-201ENST00000430231 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
AL049542.1-201ENST00000430231 ABCA10Q8WWZ4 1543 aa20.65■□□□□ 0.9
AL049542.1-201ENST00000430231 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
AL049542.1-201ENST00000430231 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
AL049542.1-201ENST00000430231 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
AL049542.1-201ENST00000430231 KDM6BO15054 1643 aa20.6■□□□□ 0.89
AL049542.1-201ENST00000430231 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
AL049542.1-201ENST00000430231 DIP2BQ9P265 1576 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms