RNA–Protein interactions for RNA: ENST00000429848.1

PTRH1-206, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

TSL 2

Gene PTRH1, Length 901 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-206ENST00000429848 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
PTRH1-206ENST00000429848 ABCC9O60706 1549 aa30.22■■■□□ 2.43
PTRH1-206ENST00000429848 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
PTRH1-206ENST00000429848 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
PTRH1-206ENST00000429848 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
PTRH1-206ENST00000429848 NACADO15069 1562 aa28.19■■■□□ 2.1
PTRH1-206ENST00000429848 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
PTRH1-206ENST00000429848 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
PTRH1-206ENST00000429848 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
PTRH1-206ENST00000429848 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
PTRH1-206ENST00000429848 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
PTRH1-206ENST00000429848 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
PTRH1-206ENST00000429848 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
PTRH1-206ENST00000429848 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
PTRH1-206ENST00000429848 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
PTRH1-206ENST00000429848 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
PTRH1-206ENST00000429848 DCAF1Q9Y4B6 1507 aa27.07■■□□□ 1.92
PTRH1-206ENST00000429848 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
PTRH1-206ENST00000429848 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
PTRH1-206ENST00000429848 CUX2O14529 1486 aa26.17■■□□□ 1.78
PTRH1-206ENST00000429848 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
PTRH1-206ENST00000429848 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
PTRH1-206ENST00000429848 ATAD2BQ9ULI0 1458 aa25.87■■□□□ 1.73
PTRH1-206ENST00000429848 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
PTRH1-206ENST00000429848 NESP48681 1621 aa25.8■■□□□ 1.72
PTRH1-206ENST00000429848 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
PTRH1-206ENST00000429848 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
PTRH1-206ENST00000429848 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
PTRH1-206ENST00000429848 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
PTRH1-206ENST00000429848 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
PTRH1-206ENST00000429848 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
PTRH1-206ENST00000429848 KIF21AQ7Z4S6 1674 aa25.49■■□□□ 1.67
PTRH1-206ENST00000429848 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
PTRH1-206ENST00000429848 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
PTRH1-206ENST00000429848 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
PTRH1-206ENST00000429848 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
PTRH1-206ENST00000429848 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
PTRH1-206ENST00000429848 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.63
PTRH1-206ENST00000429848 WDR62O43379 1518 aa25.15■■□□□ 1.62
PTRH1-206ENST00000429848 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
PTRH1-206ENST00000429848 WIZO95785 1651 aa25.06■■□□□ 1.6
PTRH1-206ENST00000429848 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
PTRH1-206ENST00000429848 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
PTRH1-206ENST00000429848 CFTRP13569 1480 aa24.81■■□□□ 1.56
PTRH1-206ENST00000429848 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
PTRH1-206ENST00000429848 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
PTRH1-206ENST00000429848 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
PTRH1-206ENST00000429848 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
PTRH1-206ENST00000429848 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
PTRH1-206ENST00000429848 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
PTRH1-206ENST00000429848 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
PTRH1-206ENST00000429848 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
PTRH1-206ENST00000429848 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
PTRH1-206ENST00000429848 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
PTRH1-206ENST00000429848 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
PTRH1-206ENST00000429848 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
PTRH1-206ENST00000429848 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
PTRH1-206ENST00000429848 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
PTRH1-206ENST00000429848 CHD1O14646 1710 aa24.36■■□□□ 1.49
PTRH1-206ENST00000429848 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
PTRH1-206ENST00000429848 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
PTRH1-206ENST00000429848 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
PTRH1-206ENST00000429848 FBLN2P98095 1184 aa24.3■■□□□ 1.48
PTRH1-206ENST00000429848 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
PTRH1-206ENST00000429848 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
PTRH1-206ENST00000429848 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
PTRH1-206ENST00000429848 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
PTRH1-206ENST00000429848 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
PTRH1-206ENST00000429848 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
PTRH1-206ENST00000429848 SOGA1O94964 1423 aa24.04■■□□□ 1.44
PTRH1-206ENST00000429848 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
PTRH1-206ENST00000429848 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
PTRH1-206ENST00000429848 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
PTRH1-206ENST00000429848 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
PTRH1-206ENST00000429848 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
PTRH1-206ENST00000429848 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
PTRH1-206ENST00000429848 WDR97A6NE52 1622 aa23.95■■□□□ 1.43
PTRH1-206ENST00000429848 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
PTRH1-206ENST00000429848 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
PTRH1-206ENST00000429848 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
PTRH1-206ENST00000429848 CUX1P39880 1505 aa23.84■■□□□ 1.41
PTRH1-206ENST00000429848 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
PTRH1-206ENST00000429848 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
PTRH1-206ENST00000429848 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
PTRH1-206ENST00000429848 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
PTRH1-206ENST00000429848 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
PTRH1-206ENST00000429848 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
PTRH1-206ENST00000429848 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
PTRH1-206ENST00000429848 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
PTRH1-206ENST00000429848 NUP160Q12769 1436 aa23.47■■□□□ 1.35
PTRH1-206ENST00000429848 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
PTRH1-206ENST00000429848 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
PTRH1-206ENST00000429848 KIF13AQ9H1H9 1805 aa23.42■■□□□ 1.34
PTRH1-206ENST00000429848 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
PTRH1-206ENST00000429848 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
PTRH1-206ENST00000429848 PRG4Q92954 1404 aaPredicted RBP23.34■■□□□ 1.33
PTRH1-206ENST00000429848 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
PTRH1-206ENST00000429848 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
PTRH1-206ENST00000429848 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
PTRH1-206ENST00000429848 NPM1P06748 294 aaKnown RBP eCLIP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms