RNA–Protein interactions for RNA: ENST00000429684.1

AC009299.1-201, humanhuman

BASIC

Gene AC009299.1, Length 717 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009299.1-201ENST00000429684 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
AC009299.1-201ENST00000429684 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
AC009299.1-201ENST00000429684 ABCC9O60706 1549 aa17.04■□□□□ 0.32
AC009299.1-201ENST00000429684 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
AC009299.1-201ENST00000429684 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
AC009299.1-201ENST00000429684 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
AC009299.1-201ENST00000429684 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
AC009299.1-201ENST00000429684 NACADO15069 1562 aa16.1■□□□□ 0.17
AC009299.1-201ENST00000429684 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
AC009299.1-201ENST00000429684 PABPN1Q86U42 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
AC009299.1-201ENST00000429684 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
AC009299.1-201ENST00000429684 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
AC009299.1-201ENST00000429684 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
AC009299.1-201ENST00000429684 BICRAQ9NZM4 1560 aa15.81■□□□□ 0.12
AC009299.1-201ENST00000429684 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
AC009299.1-201ENST00000429684 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
AC009299.1-201ENST00000429684 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
AC009299.1-201ENST00000429684 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
AC009299.1-201ENST00000429684 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
AC009299.1-201ENST00000429684 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
AC009299.1-201ENST00000429684 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
AC009299.1-201ENST00000429684 ATAD2BQ9ULI0 1458 aa14.91□□□□□ -0.02
AC009299.1-201ENST00000429684 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
AC009299.1-201ENST00000429684 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
AC009299.1-201ENST00000429684 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
AC009299.1-201ENST00000429684 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
AC009299.1-201ENST00000429684 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
AC009299.1-201ENST00000429684 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
AC009299.1-201ENST00000429684 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
AC009299.1-201ENST00000429684 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
AC009299.1-201ENST00000429684 NESP48681 1621 aa14.71□□□□□ -0.05
AC009299.1-201ENST00000429684 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
AC009299.1-201ENST00000429684 WIZO95785 1651 aa14.58□□□□□ -0.07
AC009299.1-201ENST00000429684 CUX2O14529 1486 aa14.56□□□□□ -0.08
AC009299.1-201ENST00000429684 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
AC009299.1-201ENST00000429684 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
AC009299.1-201ENST00000429684 DNAJC5Q9H3Z4 198 aa14.53□□□□□ -0.08
AC009299.1-201ENST00000429684 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
AC009299.1-201ENST00000429684 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
AC009299.1-201ENST00000429684 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
AC009299.1-201ENST00000429684 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
AC009299.1-201ENST00000429684 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
AC009299.1-201ENST00000429684 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
AC009299.1-201ENST00000429684 CFTRP13569 1480 aa14.33□□□□□ -0.12
AC009299.1-201ENST00000429684 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
AC009299.1-201ENST00000429684 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
AC009299.1-201ENST00000429684 WDR62O43379 1518 aa14.28□□□□□ -0.12
AC009299.1-201ENST00000429684 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
AC009299.1-201ENST00000429684 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
AC009299.1-201ENST00000429684 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
AC009299.1-201ENST00000429684 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
AC009299.1-201ENST00000429684 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
AC009299.1-201ENST00000429684 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
AC009299.1-201ENST00000429684 IFT140Q96RY7 1462 aa13.98□□□□□ -0.17
AC009299.1-201ENST00000429684 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
AC009299.1-201ENST00000429684 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
AC009299.1-201ENST00000429684 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
AC009299.1-201ENST00000429684 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
AC009299.1-201ENST00000429684 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC009299.1-201ENST00000429684 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
AC009299.1-201ENST00000429684 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
AC009299.1-201ENST00000429684 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
AC009299.1-201ENST00000429684 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
AC009299.1-201ENST00000429684 CUX1P39880 1505 aa13.88□□□□□ -0.19
AC009299.1-201ENST00000429684 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
AC009299.1-201ENST00000429684 SOGA1O94964 1423 aa13.86□□□□□ -0.19
AC009299.1-201ENST00000429684 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
AC009299.1-201ENST00000429684 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
AC009299.1-201ENST00000429684 RIMBP3CA6NJZ7 1639 aa13.75□□□□□ -0.21
AC009299.1-201ENST00000429684 RIMBP3BA6NNM3 1639 aa13.75□□□□□ -0.21
AC009299.1-201ENST00000429684 RIMBP3Q9UFD9 1639 aa13.75□□□□□ -0.21
AC009299.1-201ENST00000429684 FBLN2P98095 1184 aa13.75□□□□□ -0.21
AC009299.1-201ENST00000429684 CHD1O14646 1710 aa13.74□□□□□ -0.21
AC009299.1-201ENST00000429684 ARHGEF11O15085 1522 aa13.74□□□□□ -0.21
AC009299.1-201ENST00000429684 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
AC009299.1-201ENST00000429684 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
AC009299.1-201ENST00000429684 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
AC009299.1-201ENST00000429684 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
AC009299.1-201ENST00000429684 CYB5RLQ6IPT4 315 aa13.67□□□□□ -0.22
AC009299.1-201ENST00000429684 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
AC009299.1-201ENST00000429684 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
AC009299.1-201ENST00000429684 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
AC009299.1-201ENST00000429684 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
AC009299.1-201ENST00000429684 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
AC009299.1-201ENST00000429684 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
AC009299.1-201ENST00000429684 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
AC009299.1-201ENST00000429684 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
AC009299.1-201ENST00000429684 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
AC009299.1-201ENST00000429684 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
AC009299.1-201ENST00000429684 FOXD1Q16676 465 aa13.62□□□□□ -0.23
AC009299.1-201ENST00000429684 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
AC009299.1-201ENST00000429684 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
AC009299.1-201ENST00000429684 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
AC009299.1-201ENST00000429684 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
AC009299.1-201ENST00000429684 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
AC009299.1-201ENST00000429684 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
AC009299.1-201ENST00000429684 NUP160Q12769 1436 aa13.5□□□□□ -0.25
AC009299.1-201ENST00000429684 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
AC009299.1-201ENST00000429684 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
AC009299.1-201ENST00000429684 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms