RNA–Protein interactions for RNA: ENST00000429617.5

CASP7-206, Transcript of caspase 7, humanhuman

TSL 3

Gene CASP7, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-206ENST00000429617 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
CASP7-206ENST00000429617 ABCC9O60706 1549 aa26.72■■□□□ 1.87
CASP7-206ENST00000429617 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
CASP7-206ENST00000429617 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
CASP7-206ENST00000429617 NACADO15069 1562 aa25.21■■□□□ 1.63
CASP7-206ENST00000429617 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
CASP7-206ENST00000429617 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
CASP7-206ENST00000429617 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
CASP7-206ENST00000429617 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
CASP7-206ENST00000429617 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
CASP7-206ENST00000429617 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
CASP7-206ENST00000429617 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
CASP7-206ENST00000429617 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
CASP7-206ENST00000429617 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
CASP7-206ENST00000429617 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
CASP7-206ENST00000429617 CC2D2AQ9P2K1 1620 aa24.14■■□□□ 1.46
CASP7-206ENST00000429617 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.44
CASP7-206ENST00000429617 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
CASP7-206ENST00000429617 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
CASP7-206ENST00000429617 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
CASP7-206ENST00000429617 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
CASP7-206ENST00000429617 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
CASP7-206ENST00000429617 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
CASP7-206ENST00000429617 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
CASP7-206ENST00000429617 CUX2O14529 1486 aa23.05■■□□□ 1.28
CASP7-206ENST00000429617 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CASP7-206ENST00000429617 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
CASP7-206ENST00000429617 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
CASP7-206ENST00000429617 NESP48681 1621 aa22.97■■□□□ 1.27
CASP7-206ENST00000429617 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
CASP7-206ENST00000429617 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
CASP7-206ENST00000429617 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
CASP7-206ENST00000429617 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
CASP7-206ENST00000429617 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
CASP7-206ENST00000429617 WIZO95785 1651 aa22.61■■□□□ 1.21
CASP7-206ENST00000429617 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
CASP7-206ENST00000429617 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
CASP7-206ENST00000429617 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
CASP7-206ENST00000429617 WDR62O43379 1518 aa22.41■■□□□ 1.18
CASP7-206ENST00000429617 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
CASP7-206ENST00000429617 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
CASP7-206ENST00000429617 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
CASP7-206ENST00000429617 CFTRP13569 1480 aa22.31■■□□□ 1.16
CASP7-206ENST00000429617 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
CASP7-206ENST00000429617 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
CASP7-206ENST00000429617 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
CASP7-206ENST00000429617 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
CASP7-206ENST00000429617 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
CASP7-206ENST00000429617 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
CASP7-206ENST00000429617 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
CASP7-206ENST00000429617 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
CASP7-206ENST00000429617 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
CASP7-206ENST00000429617 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
CASP7-206ENST00000429617 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
CASP7-206ENST00000429617 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
CASP7-206ENST00000429617 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
CASP7-206ENST00000429617 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
CASP7-206ENST00000429617 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
CASP7-206ENST00000429617 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
CASP7-206ENST00000429617 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
CASP7-206ENST00000429617 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
CASP7-206ENST00000429617 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
CASP7-206ENST00000429617 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
CASP7-206ENST00000429617 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
CASP7-206ENST00000429617 CHD1O14646 1710 aa21.6■■□□□ 1.05
CASP7-206ENST00000429617 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
CASP7-206ENST00000429617 SOGA1O94964 1423 aa21.53■■□□□ 1.04
CASP7-206ENST00000429617 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
CASP7-206ENST00000429617 CUX1P39880 1505 aa21.52■■□□□ 1.04
CASP7-206ENST00000429617 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
CASP7-206ENST00000429617 FBLN2P98095 1184 aa21.46■■□□□ 1.03
CASP7-206ENST00000429617 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
CASP7-206ENST00000429617 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
CASP7-206ENST00000429617 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
CASP7-206ENST00000429617 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
CASP7-206ENST00000429617 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
CASP7-206ENST00000429617 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
CASP7-206ENST00000429617 GRIN2BQ13224 1484 aa21.36■■□□□ 1.01
CASP7-206ENST00000429617 SYNJ2O15056 1496 aa21.31■■□□□ 1
CASP7-206ENST00000429617 SYNJ1O43426 1573 aa21.31■■□□□ 1
CASP7-206ENST00000429617 PBRM1Q86U86 1689 aa21.29■■□□□ 1
CASP7-206ENST00000429617 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
CASP7-206ENST00000429617 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
CASP7-206ENST00000429617 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
CASP7-206ENST00000429617 ABCA5Q8WWZ7 1642 aa21.27■■□□□ 1
CASP7-206ENST00000429617 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
CASP7-206ENST00000429617 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
CASP7-206ENST00000429617 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
CASP7-206ENST00000429617 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
CASP7-206ENST00000429617 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
CASP7-206ENST00000429617 ADAMTS12P58397 1594 aa21.11■□□□□ 0.97
CASP7-206ENST00000429617 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
CASP7-206ENST00000429617 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
CASP7-206ENST00000429617 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
CASP7-206ENST00000429617 NUP160Q12769 1436 aa21.06■□□□□ 0.96
CASP7-206ENST00000429617 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
CASP7-206ENST00000429617 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
CASP7-206ENST00000429617 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
CASP7-206ENST00000429617 PRG4Q92954 1404 aaPredicted RBP20.83■□□□□ 0.93
CASP7-206ENST00000429617 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms