RNA–Protein interactions for RNA: ENST00000429133.5

XRCC5-204, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 4

Gene XRCC5, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-204ENST00000429133 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
XRCC5-204ENST00000429133 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
XRCC5-204ENST00000429133 ABCC9O60706 1549 aa30.01■■■□□ 2.39
XRCC5-204ENST00000429133 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
XRCC5-204ENST00000429133 NACADO15069 1562 aa28.83■■■□□ 2.21
XRCC5-204ENST00000429133 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
XRCC5-204ENST00000429133 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
XRCC5-204ENST00000429133 MYO15BQ96JP2 1530 aa28.61■■■□□ 2.17
XRCC5-204ENST00000429133 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
XRCC5-204ENST00000429133 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
XRCC5-204ENST00000429133 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
XRCC5-204ENST00000429133 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
XRCC5-204ENST00000429133 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
XRCC5-204ENST00000429133 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
XRCC5-204ENST00000429133 DNAJC5BQ9UF47 199 aa27.41■■□□□ 1.98
XRCC5-204ENST00000429133 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
XRCC5-204ENST00000429133 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
XRCC5-204ENST00000429133 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
XRCC5-204ENST00000429133 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
XRCC5-204ENST00000429133 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
XRCC5-204ENST00000429133 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
XRCC5-204ENST00000429133 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
XRCC5-204ENST00000429133 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
XRCC5-204ENST00000429133 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
XRCC5-204ENST00000429133 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
XRCC5-204ENST00000429133 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
XRCC5-204ENST00000429133 WIZO95785 1651 aa26.46■■□□□ 1.83
XRCC5-204ENST00000429133 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
XRCC5-204ENST00000429133 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
XRCC5-204ENST00000429133 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
XRCC5-204ENST00000429133 NESP48681 1621 aa26.02■■□□□ 1.76
XRCC5-204ENST00000429133 LAMC3Q9Y6N6 1575 aa25.92■■□□□ 1.74
XRCC5-204ENST00000429133 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
XRCC5-204ENST00000429133 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
XRCC5-204ENST00000429133 CCDC88BA6NC98 1476 aa25.75■■□□□ 1.71
XRCC5-204ENST00000429133 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
XRCC5-204ENST00000429133 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
XRCC5-204ENST00000429133 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
XRCC5-204ENST00000429133 CFTRP13569 1480 aa25.66■■□□□ 1.7
XRCC5-204ENST00000429133 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
XRCC5-204ENST00000429133 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
XRCC5-204ENST00000429133 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
XRCC5-204ENST00000429133 CUX2O14529 1486 aa25.51■■□□□ 1.67
XRCC5-204ENST00000429133 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
XRCC5-204ENST00000429133 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
XRCC5-204ENST00000429133 WDR62O43379 1518 aa25.42■■□□□ 1.66
XRCC5-204ENST00000429133 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
XRCC5-204ENST00000429133 DNMBPQ6XZF7 1577 aa25.16■■□□□ 1.62
XRCC5-204ENST00000429133 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
XRCC5-204ENST00000429133 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
XRCC5-204ENST00000429133 CUX1P39880 1505 aa25.02■■□□□ 1.6
XRCC5-204ENST00000429133 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
XRCC5-204ENST00000429133 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
XRCC5-204ENST00000429133 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
XRCC5-204ENST00000429133 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
XRCC5-204ENST00000429133 ZNF608Q9ULD9 1512 aaPredicted RBP24.89■■□□□ 1.57
XRCC5-204ENST00000429133 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
XRCC5-204ENST00000429133 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
XRCC5-204ENST00000429133 SYNJ1O43426 1573 aa24.87■■□□□ 1.57
XRCC5-204ENST00000429133 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
XRCC5-204ENST00000429133 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
XRCC5-204ENST00000429133 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
XRCC5-204ENST00000429133 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
XRCC5-204ENST00000429133 SOGA1O94964 1423 aa24.77■■□□□ 1.56
XRCC5-204ENST00000429133 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.558e-10■■■■■ 28.3
XRCC5-204ENST00000429133 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
XRCC5-204ENST00000429133 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
XRCC5-204ENST00000429133 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
XRCC5-204ENST00000429133 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
XRCC5-204ENST00000429133 CHD1O14646 1710 aa24.61■■□□□ 1.53
XRCC5-204ENST00000429133 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
XRCC5-204ENST00000429133 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
XRCC5-204ENST00000429133 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
XRCC5-204ENST00000429133 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
XRCC5-204ENST00000429133 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
XRCC5-204ENST00000429133 ADAMTS12P58397 1594 aa24.39■■□□□ 1.5
XRCC5-204ENST00000429133 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
XRCC5-204ENST00000429133 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
XRCC5-204ENST00000429133 FBLN2P98095 1184 aa24.34■■□□□ 1.49
XRCC5-204ENST00000429133 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
XRCC5-204ENST00000429133 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
XRCC5-204ENST00000429133 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
XRCC5-204ENST00000429133 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
XRCC5-204ENST00000429133 CLASP1Q7Z460 1538 aa24.23■■□□□ 1.47
XRCC5-204ENST00000429133 CUL7Q14999 1698 aa24.21■■□□□ 1.47
XRCC5-204ENST00000429133 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
XRCC5-204ENST00000429133 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
XRCC5-204ENST00000429133 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
XRCC5-204ENST00000429133 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
XRCC5-204ENST00000429133 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
XRCC5-204ENST00000429133 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
XRCC5-204ENST00000429133 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
XRCC5-204ENST00000429133 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
XRCC5-204ENST00000429133 IGF1RP08069 1367 aa24.11■■□□□ 1.45
XRCC5-204ENST00000429133 NUP160Q12769 1436 aa24.09■■□□□ 1.45
XRCC5-204ENST00000429133 SHROOM2Q13796 1616 aa23.99■■□□□ 1.43
XRCC5-204ENST00000429133 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
XRCC5-204ENST00000429133 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
XRCC5-204ENST00000429133 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
XRCC5-204ENST00000429133 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms