RNA–Protein interactions for RNA: ENST00000428800.5

LIPA-204, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 1 (best)

Gene LIPA, Length 1,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-204ENST00000428800 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
LIPA-204ENST00000428800 AEBP2Q6ZN18 517 aaPredicted RBP29.95■■■□□ 2.39
LIPA-204ENST00000428800 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
LIPA-204ENST00000428800 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
LIPA-204ENST00000428800 ABCC9O60706 1549 aa27.93■■■□□ 2.06
LIPA-204ENST00000428800 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.86
LIPA-204ENST00000428800 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
LIPA-204ENST00000428800 NACADO15069 1562 aa26.37■■□□□ 1.81
LIPA-204ENST00000428800 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
LIPA-204ENST00000428800 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
LIPA-204ENST00000428800 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
LIPA-204ENST00000428800 UNC13AQ9UPW8 1703 aa26.07■■□□□ 1.76
LIPA-204ENST00000428800 MYO15BQ96JP2 1530 aa26.01■■□□□ 1.75
LIPA-204ENST00000428800 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
LIPA-204ENST00000428800 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
LIPA-204ENST00000428800 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
LIPA-204ENST00000428800 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
LIPA-204ENST00000428800 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
LIPA-204ENST00000428800 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
LIPA-204ENST00000428800 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
LIPA-204ENST00000428800 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
LIPA-204ENST00000428800 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
LIPA-204ENST00000428800 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
LIPA-204ENST00000428800 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
LIPA-204ENST00000428800 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
LIPA-204ENST00000428800 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
LIPA-204ENST00000428800 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
LIPA-204ENST00000428800 SMARCA2P51531 1590 aa24.26■■□□□ 1.47
LIPA-204ENST00000428800 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
LIPA-204ENST00000428800 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
LIPA-204ENST00000428800 NESP48681 1621 aa24.13■■□□□ 1.45
LIPA-204ENST00000428800 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
LIPA-204ENST00000428800 WIZO95785 1651 aa24.07■■□□□ 1.44
LIPA-204ENST00000428800 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
LIPA-204ENST00000428800 FOXD1Q16676 465 aa23.9■■□□□ 1.42
LIPA-204ENST00000428800 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
LIPA-204ENST00000428800 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
LIPA-204ENST00000428800 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
LIPA-204ENST00000428800 CUX2O14529 1486 aa23.73■■□□□ 1.39
LIPA-204ENST00000428800 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
LIPA-204ENST00000428800 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
LIPA-204ENST00000428800 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
LIPA-204ENST00000428800 PDS5BQ9NTI5 1447 aa23.62■■□□□ 1.37
LIPA-204ENST00000428800 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
LIPA-204ENST00000428800 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
LIPA-204ENST00000428800 CFTRP13569 1480 aa23.48■■□□□ 1.35
LIPA-204ENST00000428800 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
LIPA-204ENST00000428800 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
LIPA-204ENST00000428800 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
LIPA-204ENST00000428800 WDR62O43379 1518 aa23.37■■□□□ 1.33
LIPA-204ENST00000428800 URB2Q14146 1524 aaKnown RBP23.3■■□□□ 1.32
LIPA-204ENST00000428800 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
LIPA-204ENST00000428800 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
LIPA-204ENST00000428800 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
LIPA-204ENST00000428800 ZNF608Q9ULD9 1512 aaPredicted RBP23.02■■□□□ 1.28
LIPA-204ENST00000428800 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
LIPA-204ENST00000428800 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
LIPA-204ENST00000428800 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
LIPA-204ENST00000428800 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
LIPA-204ENST00000428800 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.25
LIPA-204ENST00000428800 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
LIPA-204ENST00000428800 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
LIPA-204ENST00000428800 CUX1P39880 1505 aa22.82■■□□□ 1.24
LIPA-204ENST00000428800 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
LIPA-204ENST00000428800 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
LIPA-204ENST00000428800 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
LIPA-204ENST00000428800 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
LIPA-204ENST00000428800 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
LIPA-204ENST00000428800 SOGA1O94964 1423 aa22.75■■□□□ 1.23
LIPA-204ENST00000428800 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
LIPA-204ENST00000428800 FBLN2P98095 1184 aa22.66■■□□□ 1.22
LIPA-204ENST00000428800 CHD1O14646 1710 aa22.62■■□□□ 1.21
LIPA-204ENST00000428800 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
LIPA-204ENST00000428800 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
LIPA-204ENST00000428800 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
LIPA-204ENST00000428800 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
LIPA-204ENST00000428800 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
LIPA-204ENST00000428800 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
LIPA-204ENST00000428800 MSH5O43196 834 aa22.49■■□□□ 1.19
LIPA-204ENST00000428800 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
LIPA-204ENST00000428800 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
LIPA-204ENST00000428800 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
LIPA-204ENST00000428800 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
LIPA-204ENST00000428800 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
LIPA-204ENST00000428800 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
LIPA-204ENST00000428800 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
LIPA-204ENST00000428800 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
LIPA-204ENST00000428800 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
LIPA-204ENST00000428800 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
LIPA-204ENST00000428800 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
LIPA-204ENST00000428800 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
LIPA-204ENST00000428800 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
LIPA-204ENST00000428800 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
LIPA-204ENST00000428800 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
LIPA-204ENST00000428800 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
LIPA-204ENST00000428800 PIAS4Q8N2W9 510 aaPredicted RBP22.19■■□□□ 1.14
LIPA-204ENST00000428800 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
LIPA-204ENST00000428800 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
LIPA-204ENST00000428800 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
LIPA-204ENST00000428800 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms