RNA–Protein interactions for RNA: ENST00000428236.5

CXorf40A-206, Transcript of chromosome X open reading frame 40A, humanhuman

TSL 3 BASIC

Gene CXorf40A, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-206ENST00000428236 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
CXorf40A-206ENST00000428236 ABCC9O60706 1549 aa24.44■■□□□ 1.5
CXorf40A-206ENST00000428236 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
CXorf40A-206ENST00000428236 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
CXorf40A-206ENST00000428236 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.28
CXorf40A-206ENST00000428236 NACADO15069 1562 aa22.76■■□□□ 1.23
CXorf40A-206ENST00000428236 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
CXorf40A-206ENST00000428236 DCAF8L2P0C7V8 631 aa22.68■■□□□ 1.22
CXorf40A-206ENST00000428236 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
CXorf40A-206ENST00000428236 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
CXorf40A-206ENST00000428236 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
CXorf40A-206ENST00000428236 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
CXorf40A-206ENST00000428236 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
CXorf40A-206ENST00000428236 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
CXorf40A-206ENST00000428236 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
CXorf40A-206ENST00000428236 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
CXorf40A-206ENST00000428236 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
CXorf40A-206ENST00000428236 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
CXorf40A-206ENST00000428236 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
CXorf40A-206ENST00000428236 CUX2O14529 1486 aa21.21■□□□□ 0.99
CXorf40A-206ENST00000428236 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
CXorf40A-206ENST00000428236 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
CXorf40A-206ENST00000428236 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
CXorf40A-206ENST00000428236 NESP48681 1621 aa20.86■□□□□ 0.93
CXorf40A-206ENST00000428236 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
CXorf40A-206ENST00000428236 HMGXB3Q12766 1538 aa20.79■□□□□ 0.92
CXorf40A-206ENST00000428236 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
CXorf40A-206ENST00000428236 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
CXorf40A-206ENST00000428236 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
CXorf40A-206ENST00000428236 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
CXorf40A-206ENST00000428236 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
CXorf40A-206ENST00000428236 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
CXorf40A-206ENST00000428236 KIF21AQ7Z4S6 1674 aa20.55■□□□□ 0.88
CXorf40A-206ENST00000428236 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
CXorf40A-206ENST00000428236 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
CXorf40A-206ENST00000428236 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
CXorf40A-206ENST00000428236 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
CXorf40A-206ENST00000428236 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
CXorf40A-206ENST00000428236 WDR62O43379 1518 aa20.31■□□□□ 0.84
CXorf40A-206ENST00000428236 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CXorf40A-206ENST00000428236 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
CXorf40A-206ENST00000428236 WIZO95785 1651 aa20.15■□□□□ 0.82
CXorf40A-206ENST00000428236 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
CXorf40A-206ENST00000428236 CFTRP13569 1480 aa20.04■□□□□ 0.8
CXorf40A-206ENST00000428236 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
CXorf40A-206ENST00000428236 RIMBP3CA6NJZ7 1639 aa19.97■□□□□ 0.79
CXorf40A-206ENST00000428236 RIMBP3BA6NNM3 1639 aa19.97■□□□□ 0.79
CXorf40A-206ENST00000428236 RIMBP3Q9UFD9 1639 aa19.97■□□□□ 0.79
CXorf40A-206ENST00000428236 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
CXorf40A-206ENST00000428236 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
CXorf40A-206ENST00000428236 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
CXorf40A-206ENST00000428236 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
CXorf40A-206ENST00000428236 CYB5RLQ6IPT4 315 aa19.82■□□□□ 0.76
CXorf40A-206ENST00000428236 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
CXorf40A-206ENST00000428236 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
CXorf40A-206ENST00000428236 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
CXorf40A-206ENST00000428236 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
CXorf40A-206ENST00000428236 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
CXorf40A-206ENST00000428236 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
CXorf40A-206ENST00000428236 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
CXorf40A-206ENST00000428236 FBLN2P98095 1184 aa19.64■□□□□ 0.73
CXorf40A-206ENST00000428236 CHD1O14646 1710 aa19.63■□□□□ 0.73
CXorf40A-206ENST00000428236 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
CXorf40A-206ENST00000428236 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
CXorf40A-206ENST00000428236 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
CXorf40A-206ENST00000428236 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
CXorf40A-206ENST00000428236 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
CXorf40A-206ENST00000428236 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
CXorf40A-206ENST00000428236 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
CXorf40A-206ENST00000428236 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
CXorf40A-206ENST00000428236 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
CXorf40A-206ENST00000428236 SOGA1O94964 1423 aa19.41■□□□□ 0.7
CXorf40A-206ENST00000428236 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
CXorf40A-206ENST00000428236 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
CXorf40A-206ENST00000428236 SNAPC4Q5SXM2 1469 aa19.37■□□□□ 0.69
CXorf40A-206ENST00000428236 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
CXorf40A-206ENST00000428236 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
CXorf40A-206ENST00000428236 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
CXorf40A-206ENST00000428236 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
CXorf40A-206ENST00000428236 GRIN2BQ13224 1484 aa19.27■□□□□ 0.67
CXorf40A-206ENST00000428236 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
CXorf40A-206ENST00000428236 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
CXorf40A-206ENST00000428236 CUX1P39880 1505 aa19.2■□□□□ 0.66
CXorf40A-206ENST00000428236 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
CXorf40A-206ENST00000428236 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
CXorf40A-206ENST00000428236 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
CXorf40A-206ENST00000428236 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
CXorf40A-206ENST00000428236 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
CXorf40A-206ENST00000428236 CEP170Q5SW79 1584 aa19■□□□□ 0.63
CXorf40A-206ENST00000428236 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
CXorf40A-206ENST00000428236 NUP160Q12769 1436 aa18.96■□□□□ 0.63
CXorf40A-206ENST00000428236 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
CXorf40A-206ENST00000428236 ADAMTS12P58397 1594 aa18.92■□□□□ 0.62
CXorf40A-206ENST00000428236 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
CXorf40A-206ENST00000428236 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
CXorf40A-206ENST00000428236 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
CXorf40A-206ENST00000428236 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
CXorf40A-206ENST00000428236 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
CXorf40A-206ENST00000428236 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
CXorf40A-206ENST00000428236 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms