RNA–Protein interactions for RNA: ENST00000428066.5

H19-207, H19, imprinted maternally expressed transcript, humanhuman

TSL 3

Gene H19, Length 736 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-207ENST00000428066 NISCHQ9Y2I1 1504 aa30.77■■■□□ 2.52
H19-207ENST00000428066 ABCC9O60706 1549 aa27.78■■■□□ 2.04
H19-207ENST00000428066 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
H19-207ENST00000428066 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
H19-207ENST00000428066 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
H19-207ENST00000428066 NACADO15069 1562 aa26.2■■□□□ 1.78
H19-207ENST00000428066 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
H19-207ENST00000428066 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
H19-207ENST00000428066 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
H19-207ENST00000428066 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
H19-207ENST00000428066 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
H19-207ENST00000428066 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
H19-207ENST00000428066 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
H19-207ENST00000428066 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
H19-207ENST00000428066 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
H19-207ENST00000428066 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
H19-207ENST00000428066 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
H19-207ENST00000428066 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
H19-207ENST00000428066 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
H19-207ENST00000428066 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
H19-207ENST00000428066 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
H19-207ENST00000428066 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
H19-207ENST00000428066 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
H19-207ENST00000428066 SMARCA4P51532 1647 aa24■■□□□ 1.43
H19-207ENST00000428066 CUX2O14529 1486 aa23.98■■□□□ 1.43
H19-207ENST00000428066 HMGXB3Q12766 1538 aa23.95■■□□□ 1.43
H19-207ENST00000428066 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
H19-207ENST00000428066 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
H19-207ENST00000428066 NESP48681 1621 aa23.78■■□□□ 1.4
H19-207ENST00000428066 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
H19-207ENST00000428066 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
H19-207ENST00000428066 LAMC3Q9Y6N6 1575 aa23.64■■□□□ 1.37
H19-207ENST00000428066 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
H19-207ENST00000428066 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
H19-207ENST00000428066 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
H19-207ENST00000428066 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
H19-207ENST00000428066 WIZO95785 1651 aa23.39■■□□□ 1.34
H19-207ENST00000428066 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
H19-207ENST00000428066 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
H19-207ENST00000428066 WDR62O43379 1518 aa23.23■■□□□ 1.31
H19-207ENST00000428066 FANCD2Q9BXW9 1451 aa23.2■■□□□ 1.3
H19-207ENST00000428066 RSF1Q96T23 1441 aaPredicted RBP23.2■■□□□ 1.3
H19-207ENST00000428066 CFTRP13569 1480 aa23.14■■□□□ 1.29
H19-207ENST00000428066 TOP2AP11388 1531 aaKnown RBP23.12■■□□□ 1.29
H19-207ENST00000428066 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
H19-207ENST00000428066 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
H19-207ENST00000428066 URB2Q14146 1524 aaKnown RBP22.94■■□□□ 1.26
H19-207ENST00000428066 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
H19-207ENST00000428066 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
H19-207ENST00000428066 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
H19-207ENST00000428066 ABCC8Q09428 1581 aa22.75■■□□□ 1.23
H19-207ENST00000428066 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
H19-207ENST00000428066 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
H19-207ENST00000428066 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
H19-207ENST00000428066 FBLN2P98095 1184 aa22.55■■□□□ 1.2
H19-207ENST00000428066 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
H19-207ENST00000428066 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
H19-207ENST00000428066 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
H19-207ENST00000428066 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
H19-207ENST00000428066 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.2
H19-207ENST00000428066 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
H19-207ENST00000428066 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
H19-207ENST00000428066 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
H19-207ENST00000428066 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
H19-207ENST00000428066 SOGA1O94964 1423 aa22.45■■□□□ 1.18
H19-207ENST00000428066 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
H19-207ENST00000428066 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
H19-207ENST00000428066 CHD1O14646 1710 aa22.38■■□□□ 1.17
H19-207ENST00000428066 CHMP7Q8WUX9 453 aaPredicted RBP22.35■■□□□ 1.17
H19-207ENST00000428066 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
H19-207ENST00000428066 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
H19-207ENST00000428066 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
H19-207ENST00000428066 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
H19-207ENST00000428066 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
H19-207ENST00000428066 CUX1P39880 1505 aa22.26■■□□□ 1.15
H19-207ENST00000428066 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
H19-207ENST00000428066 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
H19-207ENST00000428066 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
H19-207ENST00000428066 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
H19-207ENST00000428066 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
H19-207ENST00000428066 GAPVD1Q14C86 1478 aa22.15■■□□□ 1.14
H19-207ENST00000428066 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
H19-207ENST00000428066 ABCA10Q8WWZ4 1543 aa22.07■■□□□ 1.12
H19-207ENST00000428066 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
H19-207ENST00000428066 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
H19-207ENST00000428066 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
H19-207ENST00000428066 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
H19-207ENST00000428066 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
H19-207ENST00000428066 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
H19-207ENST00000428066 BIVM-ERCC5R4GMW8 1640 aa21.87■■□□□ 1.09
H19-207ENST00000428066 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
H19-207ENST00000428066 NUP160Q12769 1436 aa21.82■■□□□ 1.08
H19-207ENST00000428066 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
H19-207ENST00000428066 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
H19-207ENST00000428066 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
H19-207ENST00000428066 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
H19-207ENST00000428066 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
H19-207ENST00000428066 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
H19-207ENST00000428066 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
H19-207ENST00000428066 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms