RNA–Protein interactions for RNA: ENST00000427398.1

LINC01874-201, Transcript of long intergenic non-protein coding RNA 1874, humanhuman

TSL 2 BASIC

Gene LINC01874, Length 510 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01874-201ENST00000427398 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
LINC01874-201ENST00000427398 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
LINC01874-201ENST00000427398 ABCC9O60706 1549 aa25.32■■□□□ 1.64
LINC01874-201ENST00000427398 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
LINC01874-201ENST00000427398 NACADO15069 1562 aa23.95■■□□□ 1.42
LINC01874-201ENST00000427398 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
LINC01874-201ENST00000427398 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
LINC01874-201ENST00000427398 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
LINC01874-201ENST00000427398 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
LINC01874-201ENST00000427398 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
LINC01874-201ENST00000427398 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
LINC01874-201ENST00000427398 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
LINC01874-201ENST00000427398 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
LINC01874-201ENST00000427398 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
LINC01874-201ENST00000427398 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
LINC01874-201ENST00000427398 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
LINC01874-201ENST00000427398 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
LINC01874-201ENST00000427398 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
LINC01874-201ENST00000427398 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
LINC01874-201ENST00000427398 NCAPD3P42695 1498 aa22.05■■□□□ 1.12
LINC01874-201ENST00000427398 ATAD2BQ9ULI0 1458 aa22.01■■□□□ 1.11
LINC01874-201ENST00000427398 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
LINC01874-201ENST00000427398 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
LINC01874-201ENST00000427398 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
LINC01874-201ENST00000427398 ERCC6Q03468 1493 aa21.85■■□□□ 1.09
LINC01874-201ENST00000427398 CUX2O14529 1486 aa21.84■■□□□ 1.09
LINC01874-201ENST00000427398 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
LINC01874-201ENST00000427398 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
LINC01874-201ENST00000427398 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
LINC01874-201ENST00000427398 NESP48681 1621 aa21.77■■□□□ 1.07
LINC01874-201ENST00000427398 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
LINC01874-201ENST00000427398 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
LINC01874-201ENST00000427398 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
LINC01874-201ENST00000427398 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
LINC01874-201ENST00000427398 WIZO95785 1651 aa21.52■■□□□ 1.04
LINC01874-201ENST00000427398 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
LINC01874-201ENST00000427398 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
LINC01874-201ENST00000427398 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
LINC01874-201ENST00000427398 WDR62O43379 1518 aa21.28■■□□□ 1
LINC01874-201ENST00000427398 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
LINC01874-201ENST00000427398 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
LINC01874-201ENST00000427398 TOP2AP11388 1531 aaKnown RBP21.21■□□□□ 0.99
LINC01874-201ENST00000427398 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
LINC01874-201ENST00000427398 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
LINC01874-201ENST00000427398 CFTRP13569 1480 aa21.15■□□□□ 0.98
LINC01874-201ENST00000427398 PRDM2Q13029 1718 aa21.14■□□□□ 0.97
LINC01874-201ENST00000427398 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
LINC01874-201ENST00000427398 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
LINC01874-201ENST00000427398 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
LINC01874-201ENST00000427398 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
LINC01874-201ENST00000427398 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
LINC01874-201ENST00000427398 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
LINC01874-201ENST00000427398 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
LINC01874-201ENST00000427398 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
LINC01874-201ENST00000427398 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
LINC01874-201ENST00000427398 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
LINC01874-201ENST00000427398 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
LINC01874-201ENST00000427398 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.89
LINC01874-201ENST00000427398 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.89
LINC01874-201ENST00000427398 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.89
LINC01874-201ENST00000427398 CHD1O14646 1710 aa20.61■□□□□ 0.89
LINC01874-201ENST00000427398 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
LINC01874-201ENST00000427398 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
LINC01874-201ENST00000427398 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
LINC01874-201ENST00000427398 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
LINC01874-201ENST00000427398 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
LINC01874-201ENST00000427398 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
LINC01874-201ENST00000427398 CUX1P39880 1505 aa20.43■□□□□ 0.86
LINC01874-201ENST00000427398 SOGA1O94964 1423 aa20.41■□□□□ 0.86
LINC01874-201ENST00000427398 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
LINC01874-201ENST00000427398 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
LINC01874-201ENST00000427398 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
LINC01874-201ENST00000427398 FBLN2P98095 1184 aa20.33■□□□□ 0.85
LINC01874-201ENST00000427398 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
LINC01874-201ENST00000427398 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
LINC01874-201ENST00000427398 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
LINC01874-201ENST00000427398 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
LINC01874-201ENST00000427398 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
LINC01874-201ENST00000427398 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
LINC01874-201ENST00000427398 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
LINC01874-201ENST00000427398 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
LINC01874-201ENST00000427398 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
LINC01874-201ENST00000427398 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
LINC01874-201ENST00000427398 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
LINC01874-201ENST00000427398 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
LINC01874-201ENST00000427398 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
LINC01874-201ENST00000427398 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
LINC01874-201ENST00000427398 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
LINC01874-201ENST00000427398 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
LINC01874-201ENST00000427398 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
LINC01874-201ENST00000427398 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
LINC01874-201ENST00000427398 CEP170Q5SW79 1584 aa20■□□□□ 0.79
LINC01874-201ENST00000427398 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
LINC01874-201ENST00000427398 NUP160Q12769 1436 aa19.96■□□□□ 0.79
LINC01874-201ENST00000427398 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
LINC01874-201ENST00000427398 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
LINC01874-201ENST00000427398 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
LINC01874-201ENST00000427398 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
LINC01874-201ENST00000427398 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
LINC01874-201ENST00000427398 KIF13AQ9H1H9 1805 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms