RNA–Protein interactions for RNA: ENST00000427308.1

AL354707.3-201, humanhuman

BASIC

Gene AL354707.3, Length 331 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL354707.3-201ENST00000427308 NISCHQ9Y2I1 1504 aa15.55■□□□□ 0.08
AL354707.3-201ENST00000427308 AEBP2Q6ZN18 517 aaPredicted RBP15.47■□□□□ 0.07
AL354707.3-201ENST00000427308 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
AL354707.3-201ENST00000427308 CCDC180Q9P1Z9 1646 aa13.91□□□□□ -0.18
AL354707.3-201ENST00000427308 ABCC9O60706 1549 aa13.9□□□□□ -0.18
AL354707.3-201ENST00000427308 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
AL354707.3-201ENST00000427308 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
AL354707.3-201ENST00000427308 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
AL354707.3-201ENST00000427308 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
AL354707.3-201ENST00000427308 NACADO15069 1562 aa13.15□□□□□ -0.3
AL354707.3-201ENST00000427308 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
AL354707.3-201ENST00000427308 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
AL354707.3-201ENST00000427308 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
AL354707.3-201ENST00000427308 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
AL354707.3-201ENST00000427308 MYO15BQ96JP2 1530 aa12.95□□□□□ -0.34
AL354707.3-201ENST00000427308 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
AL354707.3-201ENST00000427308 ZCCHC6Q5VYS8 1495 aaKnown RBP12.86□□□□□ -0.35
AL354707.3-201ENST00000427308 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
AL354707.3-201ENST00000427308 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
AL354707.3-201ENST00000427308 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
AL354707.3-201ENST00000427308 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
AL354707.3-201ENST00000427308 FOXD1Q16676 465 aa12.54□□□□□ -0.4
AL354707.3-201ENST00000427308 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.4
AL354707.3-201ENST00000427308 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
AL354707.3-201ENST00000427308 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
AL354707.3-201ENST00000427308 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
AL354707.3-201ENST00000427308 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
AL354707.3-201ENST00000427308 SMARCA2P51531 1590 aa12.07□□□□□ -0.48
AL354707.3-201ENST00000427308 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
AL354707.3-201ENST00000427308 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
AL354707.3-201ENST00000427308 MSH5O43196 834 aa12.02□□□□□ -0.49
AL354707.3-201ENST00000427308 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
AL354707.3-201ENST00000427308 BAZ1BQ9UIG0 1483 aaKnown RBP11.99□□□□□ -0.49
AL354707.3-201ENST00000427308 PEG3Q9GZU2 1588 aa11.98□□□□□ -0.49
AL354707.3-201ENST00000427308 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
AL354707.3-201ENST00000427308 NESP48681 1621 aa11.97□□□□□ -0.49
AL354707.3-201ENST00000427308 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
AL354707.3-201ENST00000427308 CUX2O14529 1486 aa11.92□□□□□ -0.5
AL354707.3-201ENST00000427308 WIZO95785 1651 aa11.88□□□□□ -0.51
AL354707.3-201ENST00000427308 LAMC3Q9Y6N6 1575 aa11.86□□□□□ -0.51
AL354707.3-201ENST00000427308 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
AL354707.3-201ENST00000427308 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
AL354707.3-201ENST00000427308 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
AL354707.3-201ENST00000427308 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
AL354707.3-201ENST00000427308 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
AL354707.3-201ENST00000427308 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
AL354707.3-201ENST00000427308 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
AL354707.3-201ENST00000427308 CFTRP13569 1480 aa11.65□□□□□ -0.54
AL354707.3-201ENST00000427308 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
AL354707.3-201ENST00000427308 WDR62O43379 1518 aa11.64□□□□□ -0.55
AL354707.3-201ENST00000427308 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
AL354707.3-201ENST00000427308 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
AL354707.3-201ENST00000427308 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
AL354707.3-201ENST00000427308 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
AL354707.3-201ENST00000427308 PIAS4Q8N2W9 510 aaPredicted RBP11.49□□□□□ -0.57
AL354707.3-201ENST00000427308 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
AL354707.3-201ENST00000427308 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
AL354707.3-201ENST00000427308 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
AL354707.3-201ENST00000427308 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
AL354707.3-201ENST00000427308 IFT140Q96RY7 1462 aa11.4□□□□□ -0.58
AL354707.3-201ENST00000427308 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
AL354707.3-201ENST00000427308 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
AL354707.3-201ENST00000427308 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
AL354707.3-201ENST00000427308 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
AL354707.3-201ENST00000427308 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
AL354707.3-201ENST00000427308 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
AL354707.3-201ENST00000427308 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
AL354707.3-201ENST00000427308 RAD54L2Q9Y4B4 1467 aa11.31□□□□□ -0.6
AL354707.3-201ENST00000427308 SOGA1O94964 1423 aa11.29□□□□□ -0.6
AL354707.3-201ENST00000427308 CHD1O14646 1710 aa11.28□□□□□ -0.6
AL354707.3-201ENST00000427308 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.6
AL354707.3-201ENST00000427308 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.6
AL354707.3-201ENST00000427308 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.6
AL354707.3-201ENST00000427308 FBLN2P98095 1184 aa11.27□□□□□ -0.61
AL354707.3-201ENST00000427308 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
AL354707.3-201ENST00000427308 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
AL354707.3-201ENST00000427308 CUX1P39880 1505 aa11.25□□□□□ -0.61
AL354707.3-201ENST00000427308 ARHGEF11O15085 1522 aa11.22□□□□□ -0.61
AL354707.3-201ENST00000427308 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
AL354707.3-201ENST00000427308 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
AL354707.3-201ENST00000427308 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
AL354707.3-201ENST00000427308 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
AL354707.3-201ENST00000427308 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
AL354707.3-201ENST00000427308 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
AL354707.3-201ENST00000427308 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
AL354707.3-201ENST00000427308 MAGI1Q96QZ7 1491 aaPredicted RBP11.13□□□□□ -0.63
AL354707.3-201ENST00000427308 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
AL354707.3-201ENST00000427308 ARAP1Q96P48 1450 aa11.12□□□□□ -0.63
AL354707.3-201ENST00000427308 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
AL354707.3-201ENST00000427308 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
AL354707.3-201ENST00000427308 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
AL354707.3-201ENST00000427308 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
AL354707.3-201ENST00000427308 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
AL354707.3-201ENST00000427308 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
AL354707.3-201ENST00000427308 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
AL354707.3-201ENST00000427308 PPP6R1Q9UPN7 881 aa11.06□□□□□ -0.64
AL354707.3-201ENST00000427308 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
AL354707.3-201ENST00000427308 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
AL354707.3-201ENST00000427308 ADAMTS12P58397 1594 aa11□□□□□ -0.65
AL354707.3-201ENST00000427308 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms