RNA–Protein interactions for RNA: ENST00000426221.5

SCML4-205, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 3

Gene SCML4, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-205ENST00000426221 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.61
SCML4-205ENST00000426221 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
SCML4-205ENST00000426221 ABCC9O60706 1549 aa32.68■■■□□ 2.82
SCML4-205ENST00000426221 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
SCML4-205ENST00000426221 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
SCML4-205ENST00000426221 NACADO15069 1562 aa31.39■■■□□ 2.62
SCML4-205ENST00000426221 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
SCML4-205ENST00000426221 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
SCML4-205ENST00000426221 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
SCML4-205ENST00000426221 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
SCML4-205ENST00000426221 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
SCML4-205ENST00000426221 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
SCML4-205ENST00000426221 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
SCML4-205ENST00000426221 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
SCML4-205ENST00000426221 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
SCML4-205ENST00000426221 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
SCML4-205ENST00000426221 CC2D2AQ9P2K1 1620 aa29.61■■■□□ 2.33
SCML4-205ENST00000426221 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
SCML4-205ENST00000426221 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
SCML4-205ENST00000426221 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
SCML4-205ENST00000426221 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
SCML4-205ENST00000426221 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
SCML4-205ENST00000426221 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
SCML4-205ENST00000426221 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
SCML4-205ENST00000426221 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
SCML4-205ENST00000426221 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
SCML4-205ENST00000426221 WIZO95785 1651 aa28.84■■■□□ 2.21
SCML4-205ENST00000426221 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
SCML4-205ENST00000426221 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
SCML4-205ENST00000426221 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
SCML4-205ENST00000426221 NESP48681 1621 aa28.34■■■□□ 2.13
SCML4-205ENST00000426221 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
SCML4-205ENST00000426221 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
SCML4-205ENST00000426221 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
SCML4-205ENST00000426221 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
SCML4-205ENST00000426221 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
SCML4-205ENST00000426221 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
SCML4-205ENST00000426221 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
SCML4-205ENST00000426221 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
SCML4-205ENST00000426221 CFTRP13569 1480 aa27.94■■■□□ 2.06
SCML4-205ENST00000426221 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
SCML4-205ENST00000426221 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
SCML4-205ENST00000426221 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
SCML4-205ENST00000426221 CUX2O14529 1486 aa27.77■■■□□ 2.04
SCML4-205ENST00000426221 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
SCML4-205ENST00000426221 WDR62O43379 1518 aa27.68■■■□□ 2.02
SCML4-205ENST00000426221 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
SCML4-205ENST00000426221 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
SCML4-205ENST00000426221 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
SCML4-205ENST00000426221 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
SCML4-205ENST00000426221 CUX1P39880 1505 aa27.27■■□□□ 1.96
SCML4-205ENST00000426221 POLA1P09884 1462 aaPredicted RBP27.18■■□□□ 1.94
SCML4-205ENST00000426221 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
SCML4-205ENST00000426221 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
SCML4-205ENST00000426221 FGD5Q6ZNL6 1462 aa27.14■■□□□ 1.94
SCML4-205ENST00000426221 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
SCML4-205ENST00000426221 SYNJ1O43426 1573 aa27.12■■□□□ 1.93
SCML4-205ENST00000426221 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
SCML4-205ENST00000426221 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
SCML4-205ENST00000426221 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
SCML4-205ENST00000426221 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
SCML4-205ENST00000426221 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
SCML4-205ENST00000426221 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
SCML4-205ENST00000426221 SOGA1O94964 1423 aa26.97■■□□□ 1.91
SCML4-205ENST00000426221 AQRO60306 1485 aaKnown RBP eCLIP26.9■■□□□ 1.9
SCML4-205ENST00000426221 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
SCML4-205ENST00000426221 ABCA5Q8WWZ7 1642 aa26.86■■□□□ 1.89
SCML4-205ENST00000426221 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
SCML4-205ENST00000426221 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
SCML4-205ENST00000426221 CHD1O14646 1710 aa26.82■■□□□ 1.88
SCML4-205ENST00000426221 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
SCML4-205ENST00000426221 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
SCML4-205ENST00000426221 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
SCML4-205ENST00000426221 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
SCML4-205ENST00000426221 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SCML4-205ENST00000426221 ADAMTS12P58397 1594 aa26.59■■□□□ 1.85
SCML4-205ENST00000426221 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
SCML4-205ENST00000426221 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
SCML4-205ENST00000426221 FBLN2P98095 1184 aa26.48■■□□□ 1.83
SCML4-205ENST00000426221 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
SCML4-205ENST00000426221 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
SCML4-205ENST00000426221 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
SCML4-205ENST00000426221 CUL7Q14999 1698 aa26.39■■□□□ 1.82
SCML4-205ENST00000426221 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
SCML4-205ENST00000426221 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
SCML4-205ENST00000426221 FHAD1B1AJZ9 1412 aa26.37■■□□□ 1.81
SCML4-205ENST00000426221 CEP170Q5SW79 1584 aa26.35■■□□□ 1.81
SCML4-205ENST00000426221 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
SCML4-205ENST00000426221 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
SCML4-205ENST00000426221 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
SCML4-205ENST00000426221 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
SCML4-205ENST00000426221 RUSC2Q8N2Y8 1516 aa26.32■■□□□ 1.8
SCML4-205ENST00000426221 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
SCML4-205ENST00000426221 IGF1RP08069 1367 aa26.25■■□□□ 1.79
SCML4-205ENST00000426221 NUP160Q12769 1436 aa26.23■■□□□ 1.79
SCML4-205ENST00000426221 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
SCML4-205ENST00000426221 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
SCML4-205ENST00000426221 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
SCML4-205ENST00000426221 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
SCML4-205ENST00000426221 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms