RNA–Protein interactions for RNA: ENST00000425923.1

SLC22A4-202, Transcript of solute carrier family 22 member 4, humanhuman

TSL 3

Gene SLC22A4, Length 463 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-202ENST00000425923 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
SLC22A4-202ENST00000425923 AEBP2Q6ZN18 517 aaPredicted RBP30.94■■■□□ 2.54
SLC22A4-202ENST00000425923 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
SLC22A4-202ENST00000425923 ABCC9O60706 1549 aa29.11■■■□□ 2.25
SLC22A4-202ENST00000425923 CCDC180Q9P1Z9 1646 aa28.58■■■□□ 2.17
SLC22A4-202ENST00000425923 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
SLC22A4-202ENST00000425923 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
SLC22A4-202ENST00000425923 NACADO15069 1562 aa27.14■■□□□ 1.94
SLC22A4-202ENST00000425923 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
SLC22A4-202ENST00000425923 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
SLC22A4-202ENST00000425923 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
SLC22A4-202ENST00000425923 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
SLC22A4-202ENST00000425923 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
SLC22A4-202ENST00000425923 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
SLC22A4-202ENST00000425923 SHROOM4Q9ULL8 1493 aa26.39■■□□□ 1.82
SLC22A4-202ENST00000425923 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
SLC22A4-202ENST00000425923 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
SLC22A4-202ENST00000425923 DNAJC5Q9H3Z4 198 aa26.22■■□□□ 1.79
SLC22A4-202ENST00000425923 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
SLC22A4-202ENST00000425923 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
SLC22A4-202ENST00000425923 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
SLC22A4-202ENST00000425923 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
SLC22A4-202ENST00000425923 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
SLC22A4-202ENST00000425923 CUX2O14529 1486 aa25.47■■□□□ 1.67
SLC22A4-202ENST00000425923 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
SLC22A4-202ENST00000425923 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
SLC22A4-202ENST00000425923 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
SLC22A4-202ENST00000425923 NESP48681 1621 aa24.85■■□□□ 1.57
SLC22A4-202ENST00000425923 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
SLC22A4-202ENST00000425923 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
SLC22A4-202ENST00000425923 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
SLC22A4-202ENST00000425923 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
SLC22A4-202ENST00000425923 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
SLC22A4-202ENST00000425923 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
SLC22A4-202ENST00000425923 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
SLC22A4-202ENST00000425923 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
SLC22A4-202ENST00000425923 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
SLC22A4-202ENST00000425923 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
SLC22A4-202ENST00000425923 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
SLC22A4-202ENST00000425923 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
SLC22A4-202ENST00000425923 WDR62O43379 1518 aa24.31■■□□□ 1.48
SLC22A4-202ENST00000425923 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
SLC22A4-202ENST00000425923 FOXD1Q16676 465 aa24.28■■□□□ 1.48
SLC22A4-202ENST00000425923 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
SLC22A4-202ENST00000425923 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.47
SLC22A4-202ENST00000425923 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
SLC22A4-202ENST00000425923 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
SLC22A4-202ENST00000425923 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
SLC22A4-202ENST00000425923 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
SLC22A4-202ENST00000425923 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
SLC22A4-202ENST00000425923 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
SLC22A4-202ENST00000425923 CFTRP13569 1480 aa23.86■■□□□ 1.41
SLC22A4-202ENST00000425923 WIZO95785 1651 aa23.85■■□□□ 1.41
SLC22A4-202ENST00000425923 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
SLC22A4-202ENST00000425923 ARHGEF11O15085 1522 aa23.79■■□□□ 1.4
SLC22A4-202ENST00000425923 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
SLC22A4-202ENST00000425923 PPP6R1Q9UPN7 881 aa23.6■■□□□ 1.37
SLC22A4-202ENST00000425923 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
SLC22A4-202ENST00000425923 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
SLC22A4-202ENST00000425923 ADRA2BP18089 450 aa23.54■■□□□ 1.36
SLC22A4-202ENST00000425923 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
SLC22A4-202ENST00000425923 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
SLC22A4-202ENST00000425923 CYB5RLQ6IPT4 315 aa23.5■■□□□ 1.35
SLC22A4-202ENST00000425923 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
SLC22A4-202ENST00000425923 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
SLC22A4-202ENST00000425923 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
SLC22A4-202ENST00000425923 CHD1O14646 1710 aa23.42■■□□□ 1.34
SLC22A4-202ENST00000425923 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
SLC22A4-202ENST00000425923 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.33
SLC22A4-202ENST00000425923 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
SLC22A4-202ENST00000425923 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
SLC22A4-202ENST00000425923 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.32
SLC22A4-202ENST00000425923 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
SLC22A4-202ENST00000425923 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
SLC22A4-202ENST00000425923 POLA1P09884 1462 aaPredicted RBP23.16■■□□□ 1.3
SLC22A4-202ENST00000425923 FBLN2P98095 1184 aa23.09■■□□□ 1.29
SLC22A4-202ENST00000425923 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
SLC22A4-202ENST00000425923 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
SLC22A4-202ENST00000425923 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
SLC22A4-202ENST00000425923 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
SLC22A4-202ENST00000425923 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
SLC22A4-202ENST00000425923 MAGI1Q96QZ7 1491 aaPredicted RBP22.99■■□□□ 1.27
SLC22A4-202ENST00000425923 SOGA1O94964 1423 aa22.97■■□□□ 1.27
SLC22A4-202ENST00000425923 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
SLC22A4-202ENST00000425923 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
SLC22A4-202ENST00000425923 GRIN2BQ13224 1484 aa22.89■■□□□ 1.25
SLC22A4-202ENST00000425923 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
SLC22A4-202ENST00000425923 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
SLC22A4-202ENST00000425923 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
SLC22A4-202ENST00000425923 CUX1P39880 1505 aa22.78■■□□□ 1.24
SLC22A4-202ENST00000425923 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
SLC22A4-202ENST00000425923 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
SLC22A4-202ENST00000425923 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
SLC22A4-202ENST00000425923 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
SLC22A4-202ENST00000425923 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
SLC22A4-202ENST00000425923 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
SLC22A4-202ENST00000425923 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
SLC22A4-202ENST00000425923 NUP160Q12769 1436 aa22.62■■□□□ 1.21
SLC22A4-202ENST00000425923 GRIN2AQ12879 1464 aa22.61■■□□□ 1.21
SLC22A4-202ENST00000425923 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms