RNA–Protein interactions for RNA: ENST00000425871.1

RPF2-202, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 5

Gene RPF2, Length 906 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-202ENST00000425871 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
RPF2-202ENST00000425871 ABCC9O60706 1549 aa26.09■■□□□ 1.77
RPF2-202ENST00000425871 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
RPF2-202ENST00000425871 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
RPF2-202ENST00000425871 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.52
RPF2-202ENST00000425871 NACADO15069 1562 aa24.29■■□□□ 1.48
RPF2-202ENST00000425871 DCAF8L2P0C7V8 631 aa24.26■■□□□ 1.47
RPF2-202ENST00000425871 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
RPF2-202ENST00000425871 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
RPF2-202ENST00000425871 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
RPF2-202ENST00000425871 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
RPF2-202ENST00000425871 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
RPF2-202ENST00000425871 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
RPF2-202ENST00000425871 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
RPF2-202ENST00000425871 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
RPF2-202ENST00000425871 DCAF1Q9Y4B6 1507 aa23.38■■□□□ 1.33
RPF2-202ENST00000425871 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
RPF2-202ENST00000425871 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
RPF2-202ENST00000425871 DNAJC5Q9H3Z4 198 aa22.84■■□□□ 1.25
RPF2-202ENST00000425871 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
RPF2-202ENST00000425871 CUX2O14529 1486 aa22.47■■□□□ 1.19
RPF2-202ENST00000425871 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
RPF2-202ENST00000425871 ATAD2BQ9ULI0 1458 aa22.37■■□□□ 1.17
RPF2-202ENST00000425871 NESP48681 1621 aa22.35■■□□□ 1.17
RPF2-202ENST00000425871 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
RPF2-202ENST00000425871 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
RPF2-202ENST00000425871 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
RPF2-202ENST00000425871 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
RPF2-202ENST00000425871 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
RPF2-202ENST00000425871 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
RPF2-202ENST00000425871 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
RPF2-202ENST00000425871 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
RPF2-202ENST00000425871 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
RPF2-202ENST00000425871 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
RPF2-202ENST00000425871 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
RPF2-202ENST00000425871 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
RPF2-202ENST00000425871 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
RPF2-202ENST00000425871 WIZO95785 1651 aa21.77■■□□□ 1.08
RPF2-202ENST00000425871 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
RPF2-202ENST00000425871 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
RPF2-202ENST00000425871 WDR62O43379 1518 aa21.7■■□□□ 1.07
RPF2-202ENST00000425871 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
RPF2-202ENST00000425871 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
RPF2-202ENST00000425871 CFTRP13569 1480 aa21.45■■□□□ 1.02
RPF2-202ENST00000425871 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
RPF2-202ENST00000425871 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
RPF2-202ENST00000425871 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
RPF2-202ENST00000425871 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
RPF2-202ENST00000425871 PRDM2Q13029 1718 aa21.29■■□□□ 1
RPF2-202ENST00000425871 RIMBP3CA6NJZ7 1639 aa21.28■■□□□ 1
RPF2-202ENST00000425871 RIMBP3BA6NNM3 1639 aa21.28■■□□□ 1
RPF2-202ENST00000425871 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
RPF2-202ENST00000425871 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
RPF2-202ENST00000425871 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
RPF2-202ENST00000425871 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
RPF2-202ENST00000425871 ARHGEF11O15085 1522 aa21.14■□□□□ 0.98
RPF2-202ENST00000425871 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
RPF2-202ENST00000425871 TOPBP1Q92547 1522 aa21.13■□□□□ 0.97
RPF2-202ENST00000425871 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
RPF2-202ENST00000425871 CHD1O14646 1710 aa21.07■□□□□ 0.96
RPF2-202ENST00000425871 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
RPF2-202ENST00000425871 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
RPF2-202ENST00000425871 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.954e-7■■■■■ 35.4
RPF2-202ENST00000425871 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
RPF2-202ENST00000425871 FBLN2P98095 1184 aa20.94■□□□□ 0.94
RPF2-202ENST00000425871 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
RPF2-202ENST00000425871 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
RPF2-202ENST00000425871 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
RPF2-202ENST00000425871 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
RPF2-202ENST00000425871 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
RPF2-202ENST00000425871 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
RPF2-202ENST00000425871 SNAPC4Q5SXM2 1469 aa20.77■□□□□ 0.92
RPF2-202ENST00000425871 SOGA1O94964 1423 aa20.76■□□□□ 0.91
RPF2-202ENST00000425871 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
RPF2-202ENST00000425871 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
RPF2-202ENST00000425871 CUX1P39880 1505 aa20.68■□□□□ 0.9
RPF2-202ENST00000425871 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
RPF2-202ENST00000425871 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
RPF2-202ENST00000425871 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
RPF2-202ENST00000425871 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
RPF2-202ENST00000425871 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
RPF2-202ENST00000425871 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
RPF2-202ENST00000425871 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
RPF2-202ENST00000425871 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
RPF2-202ENST00000425871 ERCC6L2Q5T890 1561 aa20.49■□□□□ 0.87
RPF2-202ENST00000425871 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
RPF2-202ENST00000425871 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
RPF2-202ENST00000425871 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
RPF2-202ENST00000425871 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
RPF2-202ENST00000425871 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
RPF2-202ENST00000425871 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
RPF2-202ENST00000425871 NUP160Q12769 1436 aa20.27■□□□□ 0.84
RPF2-202ENST00000425871 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
RPF2-202ENST00000425871 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
RPF2-202ENST00000425871 KIF13AQ9H1H9 1805 aa20.25■□□□□ 0.83
RPF2-202ENST00000425871 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
RPF2-202ENST00000425871 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
RPF2-202ENST00000425871 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
RPF2-202ENST00000425871 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
RPF2-202ENST00000425871 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms