RNA–Protein interactions for RNA: ENST00000425657.1

LINC01128-203, Transcript of long intergenic non-protein coding RNA 1128, humanhuman

TSL 3

Gene LINC01128, Length 845 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01128-203ENST00000425657 NISCHQ9Y2I1 1504 aa37.68■■■■□ 3.62
LINC01128-203ENST00000425657 ABCC9O60706 1549 aa34.26■■■■□ 3.08
LINC01128-203ENST00000425657 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
LINC01128-203ENST00000425657 RB1CC1Q8TDY2 1594 aa32.56■■■□□ 2.8
LINC01128-203ENST00000425657 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
LINC01128-203ENST00000425657 NACADO15069 1562 aa32.25■■■□□ 2.75
LINC01128-203ENST00000425657 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
LINC01128-203ENST00000425657 PABPN1Q86U42 306 aaKnown RBP eCLIP31.74■■■□□ 2.67
LINC01128-203ENST00000425657 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
LINC01128-203ENST00000425657 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
LINC01128-203ENST00000425657 BICRAQ9NZM4 1560 aa31.61■■■□□ 2.65
LINC01128-203ENST00000425657 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
LINC01128-203ENST00000425657 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
LINC01128-203ENST00000425657 DCAF1Q9Y4B6 1507 aa31.22■■■□□ 2.59
LINC01128-203ENST00000425657 CC2D2AQ9P2K1 1620 aa31■■■□□ 2.55
LINC01128-203ENST00000425657 CECR2Q9BXF3 1484 aa30.94■■■□□ 2.54
LINC01128-203ENST00000425657 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
LINC01128-203ENST00000425657 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
LINC01128-203ENST00000425657 DNAJC5Q9H3Z4 198 aa30.05■■■□□ 2.4
LINC01128-203ENST00000425657 CUX2O14529 1486 aa29.78■■■□□ 2.36
LINC01128-203ENST00000425657 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
LINC01128-203ENST00000425657 ERCC6Q03468 1493 aa29.63■■■□□ 2.33
LINC01128-203ENST00000425657 ATAD2BQ9ULI0 1458 aa29.58■■■□□ 2.33
LINC01128-203ENST00000425657 HMGXB3Q12766 1538 aa29.55■■■□□ 2.32
LINC01128-203ENST00000425657 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
LINC01128-203ENST00000425657 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
LINC01128-203ENST00000425657 NESP48681 1621 aa29.34■■■□□ 2.29
LINC01128-203ENST00000425657 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
LINC01128-203ENST00000425657 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
LINC01128-203ENST00000425657 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
LINC01128-203ENST00000425657 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
LINC01128-203ENST00000425657 LAMC3Q9Y6N6 1575 aa29.17■■■□□ 2.26
LINC01128-203ENST00000425657 SUPT5HO00267 1087 aaKnown RBP29.14■■■□□ 2.26
LINC01128-203ENST00000425657 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
LINC01128-203ENST00000425657 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
LINC01128-203ENST00000425657 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
LINC01128-203ENST00000425657 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
LINC01128-203ENST00000425657 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
LINC01128-203ENST00000425657 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
LINC01128-203ENST00000425657 WDR62O43379 1518 aa28.74■■■□□ 2.19
LINC01128-203ENST00000425657 WIZO95785 1651 aa28.64■■■□□ 2.17
LINC01128-203ENST00000425657 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
LINC01128-203ENST00000425657 TRIM41Q8WV44 630 aa28.51■■■□□ 2.15
LINC01128-203ENST00000425657 FANCD2Q9BXW9 1451 aa28.47■■■□□ 2.15
LINC01128-203ENST00000425657 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
LINC01128-203ENST00000425657 CFTRP13569 1480 aa28.41■■■□□ 2.14
LINC01128-203ENST00000425657 URB2Q14146 1524 aaKnown RBP28.27■■■□□ 2.12
LINC01128-203ENST00000425657 OSCARQ8IYS5 282 aa28.21■■■□□ 2.11
LINC01128-203ENST00000425657 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
LINC01128-203ENST00000425657 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
LINC01128-203ENST00000425657 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
LINC01128-203ENST00000425657 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
LINC01128-203ENST00000425657 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
LINC01128-203ENST00000425657 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
LINC01128-203ENST00000425657 IFT140Q96RY7 1462 aa28■■■□□ 2.07
LINC01128-203ENST00000425657 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
LINC01128-203ENST00000425657 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
LINC01128-203ENST00000425657 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
LINC01128-203ENST00000425657 EIF4G3O43432 1585 aaKnown RBP27.86■■■□□ 2.05
LINC01128-203ENST00000425657 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
LINC01128-203ENST00000425657 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
LINC01128-203ENST00000425657 TARBP1Q13395 1621 aaKnown RBP27.73■■■□□ 2.03
LINC01128-203ENST00000425657 CHD1O14646 1710 aa27.71■■■□□ 2.03
LINC01128-203ENST00000425657 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
LINC01128-203ENST00000425657 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
LINC01128-203ENST00000425657 ARAP1Q96P48 1450 aa27.57■■■□□ 2
LINC01128-203ENST00000425657 CYB5RLQ6IPT4 315 aa27.54■■■□□ 2
LINC01128-203ENST00000425657 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
LINC01128-203ENST00000425657 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
LINC01128-203ENST00000425657 FBLN2P98095 1184 aa27.41■■□□□ 1.98
LINC01128-203ENST00000425657 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
LINC01128-203ENST00000425657 SOGA1O94964 1423 aa27.4■■□□□ 1.98
LINC01128-203ENST00000425657 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
LINC01128-203ENST00000425657 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
LINC01128-203ENST00000425657 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
LINC01128-203ENST00000425657 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
LINC01128-203ENST00000425657 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
LINC01128-203ENST00000425657 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
LINC01128-203ENST00000425657 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
LINC01128-203ENST00000425657 CUX1P39880 1505 aa27.3■■□□□ 1.96
LINC01128-203ENST00000425657 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
LINC01128-203ENST00000425657 SYNJ2O15056 1496 aa27.24■■□□□ 1.95
LINC01128-203ENST00000425657 CHMP7Q8WUX9 453 aaPredicted RBP27.19■■□□□ 1.94
LINC01128-203ENST00000425657 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
LINC01128-203ENST00000425657 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
LINC01128-203ENST00000425657 BIVM-ERCC5R4GMW8 1640 aa27.13■■□□□ 1.93
LINC01128-203ENST00000425657 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
LINC01128-203ENST00000425657 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
LINC01128-203ENST00000425657 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
LINC01128-203ENST00000425657 EEA1Q15075 1411 aa27.05■■□□□ 1.92
LINC01128-203ENST00000425657 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
LINC01128-203ENST00000425657 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
LINC01128-203ENST00000425657 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
LINC01128-203ENST00000425657 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
LINC01128-203ENST00000425657 NUP160Q12769 1436 aa26.86■■□□□ 1.89
LINC01128-203ENST00000425657 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
LINC01128-203ENST00000425657 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
LINC01128-203ENST00000425657 SHROOM2Q13796 1616 aa26.83■■□□□ 1.89
LINC01128-203ENST00000425657 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
LINC01128-203ENST00000425657 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms