RNA–Protein interactions for RNA: ENST00000425631.5

CSMD2-AS1-202, CSMD2 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CSMD2-AS1, Length 1,367 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-AS1-202ENST00000425631 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
CSMD2-AS1-202ENST00000425631 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
CSMD2-AS1-202ENST00000425631 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
CSMD2-AS1-202ENST00000425631 ABCC9O60706 1549 aa20.69■□□□□ 0.9
CSMD2-AS1-202ENST00000425631 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
CSMD2-AS1-202ENST00000425631 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
CSMD2-AS1-202ENST00000425631 NACADO15069 1562 aa19.82■□□□□ 0.76
CSMD2-AS1-202ENST00000425631 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
CSMD2-AS1-202ENST00000425631 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
CSMD2-AS1-202ENST00000425631 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
CSMD2-AS1-202ENST00000425631 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
CSMD2-AS1-202ENST00000425631 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
CSMD2-AS1-202ENST00000425631 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
CSMD2-AS1-202ENST00000425631 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
CSMD2-AS1-202ENST00000425631 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
CSMD2-AS1-202ENST00000425631 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
CSMD2-AS1-202ENST00000425631 SHROOM4Q9ULL8 1493 aa19.12■□□□□ 0.65
CSMD2-AS1-202ENST00000425631 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
CSMD2-AS1-202ENST00000425631 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
CSMD2-AS1-202ENST00000425631 CECR2Q9BXF3 1484 aa18.64■□□□□ 0.58
CSMD2-AS1-202ENST00000425631 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
CSMD2-AS1-202ENST00000425631 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
CSMD2-AS1-202ENST00000425631 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
CSMD2-AS1-202ENST00000425631 BAZ1AQ9NRL2 1556 aaPredicted RBP18.29■□□□□ 0.52
CSMD2-AS1-202ENST00000425631 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.51
CSMD2-AS1-202ENST00000425631 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
CSMD2-AS1-202ENST00000425631 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
CSMD2-AS1-202ENST00000425631 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
CSMD2-AS1-202ENST00000425631 MROH2BQ7Z745 1585 aa18.14■□□□□ 0.49
CSMD2-AS1-202ENST00000425631 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
CSMD2-AS1-202ENST00000425631 WIZO95785 1651 aa17.91■□□□□ 0.46
CSMD2-AS1-202ENST00000425631 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
CSMD2-AS1-202ENST00000425631 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
CSMD2-AS1-202ENST00000425631 NESP48681 1621 aa17.85■□□□□ 0.45
CSMD2-AS1-202ENST00000425631 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
CSMD2-AS1-202ENST00000425631 CUX2O14529 1486 aa17.78■□□□□ 0.44
CSMD2-AS1-202ENST00000425631 CADPSQ9ULU8 1353 aa17.76■□□□□ 0.43
CSMD2-AS1-202ENST00000425631 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
CSMD2-AS1-202ENST00000425631 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
CSMD2-AS1-202ENST00000425631 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
CSMD2-AS1-202ENST00000425631 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
CSMD2-AS1-202ENST00000425631 CFTRP13569 1480 aa17.62■□□□□ 0.41
CSMD2-AS1-202ENST00000425631 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
CSMD2-AS1-202ENST00000425631 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
CSMD2-AS1-202ENST00000425631 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
CSMD2-AS1-202ENST00000425631 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
CSMD2-AS1-202ENST00000425631 WDR62O43379 1518 aa17.5■□□□□ 0.39
CSMD2-AS1-202ENST00000425631 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
CSMD2-AS1-202ENST00000425631 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
CSMD2-AS1-202ENST00000425631 URB2Q14146 1524 aaKnown RBP17.36■□□□□ 0.37
CSMD2-AS1-202ENST00000425631 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
CSMD2-AS1-202ENST00000425631 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
CSMD2-AS1-202ENST00000425631 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
CSMD2-AS1-202ENST00000425631 DNMBPQ6XZF7 1577 aa17.2■□□□□ 0.34
CSMD2-AS1-202ENST00000425631 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
CSMD2-AS1-202ENST00000425631 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
CSMD2-AS1-202ENST00000425631 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
CSMD2-AS1-202ENST00000425631 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
CSMD2-AS1-202ENST00000425631 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.32
CSMD2-AS1-202ENST00000425631 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
CSMD2-AS1-202ENST00000425631 CUX1P39880 1505 aa17.03■□□□□ 0.32
CSMD2-AS1-202ENST00000425631 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 SOGA1O94964 1423 aa17■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 OSCARQ8IYS5 282 aa17■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSMD2-AS1-202ENST00000425631 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
CSMD2-AS1-202ENST00000425631 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
CSMD2-AS1-202ENST00000425631 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
CSMD2-AS1-202ENST00000425631 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
CSMD2-AS1-202ENST00000425631 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
CSMD2-AS1-202ENST00000425631 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
CSMD2-AS1-202ENST00000425631 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
CSMD2-AS1-202ENST00000425631 MAGI1Q96QZ7 1491 aaPredicted RBP16.82■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 CHD1O14646 1710 aa16.8■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 FBLN2P98095 1184 aa16.78■□□□□ 0.28
CSMD2-AS1-202ENST00000425631 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
CSMD2-AS1-202ENST00000425631 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
CSMD2-AS1-202ENST00000425631 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
CSMD2-AS1-202ENST00000425631 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
CSMD2-AS1-202ENST00000425631 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
CSMD2-AS1-202ENST00000425631 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
CSMD2-AS1-202ENST00000425631 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
CSMD2-AS1-202ENST00000425631 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
CSMD2-AS1-202ENST00000425631 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
CSMD2-AS1-202ENST00000425631 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CSMD2-AS1-202ENST00000425631 ADAMTS12P58397 1594 aa16.63■□□□□ 0.25
CSMD2-AS1-202ENST00000425631 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
CSMD2-AS1-202ENST00000425631 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
CSMD2-AS1-202ENST00000425631 NUP160Q12769 1436 aa16.56■□□□□ 0.24
CSMD2-AS1-202ENST00000425631 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
CSMD2-AS1-202ENST00000425631 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
CSMD2-AS1-202ENST00000425631 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
CSMD2-AS1-202ENST00000425631 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
CSMD2-AS1-202ENST00000425631 IGF1RP08069 1367 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms