RNA–Protein interactions for RNA: ENST00000425462.1

RPEP3-201, Transcript of ribulose-5-phosphate-3-epimerase pseudogene 3, humanhuman

BASIC

Gene RPEP3, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPEP3-201ENST00000425462 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
RPEP3-201ENST00000425462 ABCC9O60706 1549 aa10.3□□□□□ -0.76
RPEP3-201ENST00000425462 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
RPEP3-201ENST00000425462 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
RPEP3-201ENST00000425462 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
RPEP3-201ENST00000425462 RB1CC1Q8TDY2 1594 aa9.7□□□□□ -0.86
RPEP3-201ENST00000425462 PABPN1Q86U42 306 aaKnown RBP eCLIP9.65□□□□□ -0.86
RPEP3-201ENST00000425462 NACADO15069 1562 aa9.65□□□□□ -0.86
RPEP3-201ENST00000425462 ZCCHC6Q5VYS8 1495 aaKnown RBP9.55□□□□□ -0.88
RPEP3-201ENST00000425462 MYO15BQ96JP2 1530 aa9.52□□□□□ -0.88
RPEP3-201ENST00000425462 BICRAQ9NZM4 1560 aa9.52□□□□□ -0.89
RPEP3-201ENST00000425462 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
RPEP3-201ENST00000425462 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
RPEP3-201ENST00000425462 SCRIBQ14160 1630 aa9.4□□□□□ -0.9
RPEP3-201ENST00000425462 AEBP2Q6ZN18 517 aaPredicted RBP9.34□□□□□ -0.91
RPEP3-201ENST00000425462 SHROOM4Q9ULL8 1493 aa9.26□□□□□ -0.93
RPEP3-201ENST00000425462 CC2D2AQ9P2K1 1620 aa9.25□□□□□ -0.93
RPEP3-201ENST00000425462 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
RPEP3-201ENST00000425462 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
RPEP3-201ENST00000425462 CHIC1Q5VXU3 224 aa9.23□□□□□ -0.93
RPEP3-201ENST00000425462 ATAD2BQ9ULI0 1458 aa8.98□□□□□ -0.97
RPEP3-201ENST00000425462 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
RPEP3-201ENST00000425462 SMARCA4P51532 1647 aa8.94□□□□□ -0.98
RPEP3-201ENST00000425462 MROH2BQ7Z745 1585 aa8.91□□□□□ -0.98
RPEP3-201ENST00000425462 NESP48681 1621 aa8.89□□□□□ -0.99
RPEP3-201ENST00000425462 SMARCA2P51531 1590 aa8.86□□□□□ -0.99
RPEP3-201ENST00000425462 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
RPEP3-201ENST00000425462 HMGXB3Q12766 1538 aa8.86□□□□□ -0.99
RPEP3-201ENST00000425462 BAZ1BQ9UIG0 1483 aaKnown RBP8.85□□□□□ -0.99
RPEP3-201ENST00000425462 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
RPEP3-201ENST00000425462 ERCC6Q03468 1493 aa8.81□□□□□ -1
RPEP3-201ENST00000425462 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
RPEP3-201ENST00000425462 WIZO95785 1651 aa8.76□□□□□ -1.01
RPEP3-201ENST00000425462 CUX2O14529 1486 aa8.76□□□□□ -1.01
RPEP3-201ENST00000425462 RSF1Q96T23 1441 aaPredicted RBP8.74□□□□□ -1.01
RPEP3-201ENST00000425462 THOC2Q8NI27 1593 aaKnown RBP8.71□□□□□ -1.02
RPEP3-201ENST00000425462 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
RPEP3-201ENST00000425462 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
RPEP3-201ENST00000425462 KIF21AQ7Z4S6 1674 aa8.66□□□□□ -1.02
RPEP3-201ENST00000425462 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
RPEP3-201ENST00000425462 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
RPEP3-201ENST00000425462 CFTRP13569 1480 aa8.62□□□□□ -1.03
RPEP3-201ENST00000425462 MRC2Q9UBG0 1479 aa8.62□□□□□ -1.03
RPEP3-201ENST00000425462 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
RPEP3-201ENST00000425462 WDR62O43379 1518 aa8.59□□□□□ -1.03
RPEP3-201ENST00000425462 CCDC88BA6NC98 1476 aa8.59□□□□□ -1.03
RPEP3-201ENST00000425462 CEP164Q9UPV0 1460 aa8.58□□□□□ -1.04
RPEP3-201ENST00000425462 URB2Q14146 1524 aaKnown RBP8.58□□□□□ -1.04
RPEP3-201ENST00000425462 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
RPEP3-201ENST00000425462 TOPBP1Q92547 1522 aa8.46□□□□□ -1.05
RPEP3-201ENST00000425462 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
RPEP3-201ENST00000425462 SUPT5HO00267 1087 aaKnown RBP8.41□□□□□ -1.06
RPEP3-201ENST00000425462 AQRO60306 1485 aaKnown RBP eCLIP8.4□□□□□ -1.06
RPEP3-201ENST00000425462 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
RPEP3-201ENST00000425462 RAD54L2Q9Y4B4 1467 aa8.4□□□□□ -1.06
RPEP3-201ENST00000425462 OSCARQ8IYS5 282 aa8.39□□□□□ -1.07
RPEP3-201ENST00000425462 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
RPEP3-201ENST00000425462 POLA1P09884 1462 aaPredicted RBP8.38□□□□□ -1.07
RPEP3-201ENST00000425462 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
RPEP3-201ENST00000425462 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
RPEP3-201ENST00000425462 TDRD9Q8NDG6 1382 aaKnown RBP8.36□□□□□ -1.07
RPEP3-201ENST00000425462 CUX1P39880 1505 aa8.36□□□□□ -1.07
RPEP3-201ENST00000425462 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
RPEP3-201ENST00000425462 FGD5Q6ZNL6 1462 aa8.33□□□□□ -1.08
RPEP3-201ENST00000425462 SOGA1O94964 1423 aa8.33□□□□□ -1.08
RPEP3-201ENST00000425462 ABCC8Q09428 1581 aa8.33□□□□□ -1.08
RPEP3-201ENST00000425462 FBLN2P98095 1184 aa8.3□□□□□ -1.08
RPEP3-201ENST00000425462 SNAPC4Q5SXM2 1469 aa8.29□□□□□ -1.08
RPEP3-201ENST00000425462 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
RPEP3-201ENST00000425462 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
RPEP3-201ENST00000425462 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
RPEP3-201ENST00000425462 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
RPEP3-201ENST00000425462 CYB5RLQ6IPT4 315 aa8.25□□□□□ -1.09
RPEP3-201ENST00000425462 ARAP1Q96P48 1450 aa8.25□□□□□ -1.09
RPEP3-201ENST00000425462 CHD1O14646 1710 aa8.24□□□□□ -1.09
RPEP3-201ENST00000425462 GRIN2BQ13224 1484 aa8.23□□□□□ -1.09
RPEP3-201ENST00000425462 GAPVD1Q14C86 1478 aa8.22□□□□□ -1.09
RPEP3-201ENST00000425462 PHF23Q9BUL5 403 aaPredicted RBP8.22□□□□□ -1.09
RPEP3-201ENST00000425462 ABCA10Q8WWZ4 1543 aa8.22□□□□□ -1.09
RPEP3-201ENST00000425462 SYNJ1O43426 1573 aa8.22□□□□□ -1.09
RPEP3-201ENST00000425462 WDR97A6NE52 1622 aa8.21□□□□□ -1.09
RPEP3-201ENST00000425462 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.1
RPEP3-201ENST00000425462 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.1
RPEP3-201ENST00000425462 MAGI1Q96QZ7 1491 aaPredicted RBP8.2□□□□□ -1.1
RPEP3-201ENST00000425462 WRNQ14191 1432 aaPredicted RBP eCLIP8.2□□□□□ -1.1
RPEP3-201ENST00000425462 SYNJ2O15056 1496 aa8.19□□□□□ -1.1
RPEP3-201ENST00000425462 ABCA5Q8WWZ7 1642 aa8.19□□□□□ -1.1
RPEP3-201ENST00000425462 ERCC6L2Q5T890 1561 aa8.17□□□□□ -1.1
RPEP3-201ENST00000425462 TOP2BQ02880 1626 aa8.17□□□□□ -1.1
RPEP3-201ENST00000425462 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
RPEP3-201ENST00000425462 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
RPEP3-201ENST00000425462 GRIN2AQ12879 1464 aa8.14□□□□□ -1.11
RPEP3-201ENST00000425462 ADAMTS12P58397 1594 aa8.14□□□□□ -1.11
RPEP3-201ENST00000425462 NUP160Q12769 1436 aa8.13□□□□□ -1.11
RPEP3-201ENST00000425462 CEP170Q5SW79 1584 aa8.13□□□□□ -1.11
RPEP3-201ENST00000425462 FHAD1B1AJZ9 1412 aa8.11□□□□□ -1.11
RPEP3-201ENST00000425462 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
RPEP3-201ENST00000425462 IGF1RP08069 1367 aa8.09□□□□□ -1.12
RPEP3-201ENST00000425462 ERICH3Q5RHP9 1530 aa8.08□□□□□ -1.12
RPEP3-201ENST00000425462 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms