RNA–Protein interactions for RNA: ENST00000425358.2

HOTAIRM1-201, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 3

Gene HOTAIRM1, Length 637 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-201ENST00000425358 NISCHQ9Y2I1 1504 aa51.28■■■■■ 5.8
HOTAIRM1-201ENST00000425358 CCDC180Q9P1Z9 1646 aa45.86■■■■■ 4.93
HOTAIRM1-201ENST00000425358 ABCC9O60706 1549 aa45.72■■■■■ 4.91
HOTAIRM1-201ENST00000425358 RB1CC1Q8TDY2 1594 aa43.58■■■■■ 4.57
HOTAIRM1-201ENST00000425358 NACADO15069 1562 aa43.33■■■■■ 4.53
HOTAIRM1-201ENST00000425358 DCAF8L2P0C7V8 631 aa43.25■■■■■ 4.51
HOTAIRM1-201ENST00000425358 ZCCHC6Q5VYS8 1495 aaKnown RBP42.82■■■■■ 4.45
HOTAIRM1-201ENST00000425358 MYO15BQ96JP2 1530 aa42.8■■■■■ 4.44
HOTAIRM1-201ENST00000425358 DNAJC5BQ9UF47 199 aa42.73■■■■■ 4.43
HOTAIRM1-201ENST00000425358 PABPN1Q86U42 306 aaKnown RBP eCLIP42.64■■■■■ 4.42
HOTAIRM1-201ENST00000425358 UNC13AQ9UPW8 1703 aa42.55■■■■■ 4.4
HOTAIRM1-201ENST00000425358 DCAF1Q9Y4B6 1507 aa42.46■■■■■ 4.39
HOTAIRM1-201ENST00000425358 BICRAQ9NZM4 1560 aa42.31■■■■■ 4.36
HOTAIRM1-201ENST00000425358 SCRIBQ14160 1630 aa41.85■■■■■ 4.29
HOTAIRM1-201ENST00000425358 SHROOM4Q9ULL8 1493 aa41.73■■■■■ 4.27
HOTAIRM1-201ENST00000425358 CC2D2AQ9P2K1 1620 aa41.28■■■■■ 4.2
HOTAIRM1-201ENST00000425358 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
HOTAIRM1-201ENST00000425358 CECR2Q9BXF3 1484 aa41.15■■■■■ 4.18
HOTAIRM1-201ENST00000425358 NCAPD3P42695 1498 aa40.02■■■■■ 4
HOTAIRM1-201ENST00000425358 ATAD2BQ9ULI0 1458 aa39.94■■■■□ 3.98
HOTAIRM1-201ENST00000425358 SMARCA4P51532 1647 aa39.94■■■■□ 3.98
HOTAIRM1-201ENST00000425358 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
HOTAIRM1-201ENST00000425358 BAZ1AQ9NRL2 1556 aaPredicted RBP39.77■■■■□ 3.96
HOTAIRM1-201ENST00000425358 HMGXB3Q12766 1538 aa39.72■■■■□ 3.95
HOTAIRM1-201ENST00000425358 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
HOTAIRM1-201ENST00000425358 MROH2BQ7Z745 1585 aa39.53■■■■□ 3.92
HOTAIRM1-201ENST00000425358 PEG3Q9GZU2 1588 aa39.53■■■■□ 3.92
HOTAIRM1-201ENST00000425358 ERCC6Q03468 1493 aa39.45■■■■□ 3.91
HOTAIRM1-201ENST00000425358 NESP48681 1621 aa39.34■■■■□ 3.89
HOTAIRM1-201ENST00000425358 CUX2O14529 1486 aa39.28■■■■□ 3.88
HOTAIRM1-201ENST00000425358 RSF1Q96T23 1441 aaPredicted RBP39.26■■■■□ 3.88
HOTAIRM1-201ENST00000425358 WIZO95785 1651 aa39.13■■■■□ 3.85
HOTAIRM1-201ENST00000425358 LAMC3Q9Y6N6 1575 aa39.06■■■■□ 3.84
HOTAIRM1-201ENST00000425358 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
HOTAIRM1-201ENST00000425358 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
HOTAIRM1-201ENST00000425358 THOC2Q8NI27 1593 aaKnown RBP38.85■■■■□ 3.81
HOTAIRM1-201ENST00000425358 CADPSQ9ULU8 1353 aa38.83■■■■□ 3.81
HOTAIRM1-201ENST00000425358 KIF21AQ7Z4S6 1674 aa38.8■■■■□ 3.8
HOTAIRM1-201ENST00000425358 TOP2AP11388 1531 aaKnown RBP38.73■■■■□ 3.79
HOTAIRM1-201ENST00000425358 SUPT5HO00267 1087 aaKnown RBP38.6■■■■□ 3.77
HOTAIRM1-201ENST00000425358 MRC2Q9UBG0 1479 aa38.51■■■■□ 3.76
HOTAIRM1-201ENST00000425358 CFTRP13569 1480 aa38.42■■■■□ 3.74
HOTAIRM1-201ENST00000425358 CEP164Q9UPV0 1460 aa38.4■■■■□ 3.74
HOTAIRM1-201ENST00000425358 FANCD2Q9BXW9 1451 aa38.39■■■■□ 3.74
HOTAIRM1-201ENST00000425358 WDR62O43379 1518 aa38.38■■■■□ 3.74
HOTAIRM1-201ENST00000425358 CCDC88BA6NC98 1476 aa38.27■■■■□ 3.72
HOTAIRM1-201ENST00000425358 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.68
HOTAIRM1-201ENST00000425358 PRDM2Q13029 1718 aa37.98■■■■□ 3.67
HOTAIRM1-201ENST00000425358 TOPBP1Q92547 1522 aa37.68■■■■□ 3.62
HOTAIRM1-201ENST00000425358 IFT140Q96RY7 1462 aa37.63■■■■□ 3.61
HOTAIRM1-201ENST00000425358 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
HOTAIRM1-201ENST00000425358 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
HOTAIRM1-201ENST00000425358 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
HOTAIRM1-201ENST00000425358 DNMBPQ6XZF7 1577 aa37.55■■■■□ 3.6
HOTAIRM1-201ENST00000425358 TRIM41Q8WV44 630 aa37.46■■■■□ 3.59
HOTAIRM1-201ENST00000425358 EIF4G3O43432 1585 aaKnown RBP37.33■■■■□ 3.57
HOTAIRM1-201ENST00000425358 POLA1P09884 1462 aaPredicted RBP37.32■■■■□ 3.56
HOTAIRM1-201ENST00000425358 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
HOTAIRM1-201ENST00000425358 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.56
HOTAIRM1-201ENST00000425358 RAD54L2Q9Y4B4 1467 aa37.2■■■■□ 3.54
HOTAIRM1-201ENST00000425358 SOGA1O94964 1423 aa37.17■■■■□ 3.54
HOTAIRM1-201ENST00000425358 CUX1P39880 1505 aa37.12■■■■□ 3.53
HOTAIRM1-201ENST00000425358 FGD5Q6ZNL6 1462 aa37.12■■■■□ 3.53
HOTAIRM1-201ENST00000425358 TDRD9Q8NDG6 1382 aaKnown RBP37.07■■■■□ 3.53
HOTAIRM1-201ENST00000425358 RIMBP3CA6NJZ7 1639 aa37.02■■■■□ 3.52
HOTAIRM1-201ENST00000425358 RIMBP3BA6NNM3 1639 aa37.02■■■■□ 3.52
HOTAIRM1-201ENST00000425358 RIMBP3Q9UFD9 1639 aa37.02■■■■□ 3.52
HOTAIRM1-201ENST00000425358 FBLN2P98095 1184 aa37■■■■□ 3.51
HOTAIRM1-201ENST00000425358 CHD1O14646 1710 aa36.99■■■■□ 3.51
HOTAIRM1-201ENST00000425358 WRNQ14191 1432 aaPredicted RBP eCLIP36.97■■■■□ 3.51
HOTAIRM1-201ENST00000425358 ARHGEF11O15085 1522 aa36.93■■■■□ 3.5
HOTAIRM1-201ENST00000425358 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
HOTAIRM1-201ENST00000425358 SYNJ1O43426 1573 aa36.89■■■■□ 3.5
HOTAIRM1-201ENST00000425358 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
HOTAIRM1-201ENST00000425358 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
HOTAIRM1-201ENST00000425358 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
HOTAIRM1-201ENST00000425358 GRIN2BQ13224 1484 aa36.81■■■■□ 3.48
HOTAIRM1-201ENST00000425358 MAGI1Q96QZ7 1491 aaPredicted RBP36.76■■■■□ 3.48
HOTAIRM1-201ENST00000425358 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
HOTAIRM1-201ENST00000425358 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
HOTAIRM1-201ENST00000425358 GAPVD1Q14C86 1478 aa36.7■■■■□ 3.47
HOTAIRM1-201ENST00000425358 CYB5RLQ6IPT4 315 aa36.69■■■■□ 3.46
HOTAIRM1-201ENST00000425358 SYNJ2O15056 1496 aa36.64■■■■□ 3.46
HOTAIRM1-201ENST00000425358 PBRM1Q86U86 1689 aa36.62■■■■□ 3.45
HOTAIRM1-201ENST00000425358 CLASP1Q7Z460 1538 aa36.6■■■■□ 3.45
HOTAIRM1-201ENST00000425358 ABCA5Q8WWZ7 1642 aa36.6■■■■□ 3.45
HOTAIRM1-201ENST00000425358 ARAP1Q96P48 1450 aa36.6■■■■□ 3.45
HOTAIRM1-201ENST00000425358 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
HOTAIRM1-201ENST00000425358 GRIN2AQ12879 1464 aa36.32■■■■□ 3.41
HOTAIRM1-201ENST00000425358 ADAMTS12P58397 1594 aa36.32■■■■□ 3.4
HOTAIRM1-201ENST00000425358 FHAD1B1AJZ9 1412 aa36.25■■■■□ 3.39
HOTAIRM1-201ENST00000425358 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
HOTAIRM1-201ENST00000425358 TRHP20396 242 aaPredicted RBP36.21■■■■□ 3.39
HOTAIRM1-201ENST00000425358 NUP160Q12769 1436 aa36.19■■■■□ 3.38
HOTAIRM1-201ENST00000425358 CEP170Q5SW79 1584 aa36.18■■■■□ 3.38
HOTAIRM1-201ENST00000425358 KIF27Q86VH2 1401 aa36.14■■■■□ 3.38
HOTAIRM1-201ENST00000425358 ERCC6L2Q5T890 1561 aa36.07■■■■□ 3.37
HOTAIRM1-201ENST00000425358 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
HOTAIRM1-201ENST00000425358 SHROOM2Q13796 1616 aa35.98■■■■□ 3.35
HOTAIRM1-201ENST00000425358 IGF1RP08069 1367 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms