RNA–Protein interactions for RNA: ENST00000425343.6

PGC-204, Transcript of progastricsin, humanhuman

TSL 2 BASIC

Gene PGC, Length 1,152 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGC-204ENST00000425343 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.3
PGC-204ENST00000425343 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
PGC-204ENST00000425343 ABCC9O60706 1549 aa24.78■■□□□ 1.56
PGC-204ENST00000425343 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
PGC-204ENST00000425343 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
PGC-204ENST00000425343 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
PGC-204ENST00000425343 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
PGC-204ENST00000425343 NACADO15069 1562 aa24.24■■□□□ 1.47
PGC-204ENST00000425343 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
PGC-204ENST00000425343 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
PGC-204ENST00000425343 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
PGC-204ENST00000425343 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
PGC-204ENST00000425343 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
PGC-204ENST00000425343 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
PGC-204ENST00000425343 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
PGC-204ENST00000425343 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
PGC-204ENST00000425343 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
PGC-204ENST00000425343 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
PGC-204ENST00000425343 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
PGC-204ENST00000425343 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
PGC-204ENST00000425343 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
PGC-204ENST00000425343 WIZO95785 1651 aa22.51■■□□□ 1.19
PGC-204ENST00000425343 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
PGC-204ENST00000425343 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
PGC-204ENST00000425343 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
PGC-204ENST00000425343 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
PGC-204ENST00000425343 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
PGC-204ENST00000425343 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
PGC-204ENST00000425343 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
PGC-204ENST00000425343 HMGXB3Q12766 1538 aa22.3■■□□□ 1.16
PGC-204ENST00000425343 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
PGC-204ENST00000425343 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
PGC-204ENST00000425343 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
PGC-204ENST00000425343 CFTRP13569 1480 aa21.71■■□□□ 1.07
PGC-204ENST00000425343 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
PGC-204ENST00000425343 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
PGC-204ENST00000425343 NESP48681 1621 aa21.62■■□□□ 1.05
PGC-204ENST00000425343 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
PGC-204ENST00000425343 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
PGC-204ENST00000425343 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
PGC-204ENST00000425343 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
PGC-204ENST00000425343 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
PGC-204ENST00000425343 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PGC-204ENST00000425343 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
PGC-204ENST00000425343 ERCC6Q03468 1493 aa21.32■■□□□ 1
PGC-204ENST00000425343 SYNJ1O43426 1573 aa21.27■■□□□ 1
PGC-204ENST00000425343 TRIM41Q8WV44 630 aa21.27■■□□□ 1
PGC-204ENST00000425343 CUX1P39880 1505 aa21.26■□□□□ 0.99
PGC-204ENST00000425343 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
PGC-204ENST00000425343 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
PGC-204ENST00000425343 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
PGC-204ENST00000425343 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
PGC-204ENST00000425343 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
PGC-204ENST00000425343 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
PGC-204ENST00000425343 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
PGC-204ENST00000425343 WDR62O43379 1518 aa21.14■□□□□ 0.98
PGC-204ENST00000425343 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
PGC-204ENST00000425343 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
PGC-204ENST00000425343 SOGA1O94964 1423 aa20.99■□□□□ 0.95
PGC-204ENST00000425343 CUX2O14529 1486 aa20.95■□□□□ 0.94
PGC-204ENST00000425343 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
PGC-204ENST00000425343 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
PGC-204ENST00000425343 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
PGC-204ENST00000425343 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
PGC-204ENST00000425343 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
PGC-204ENST00000425343 EEA1Q15075 1411 aa20.87■□□□□ 0.93
PGC-204ENST00000425343 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
PGC-204ENST00000425343 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
PGC-204ENST00000425343 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
PGC-204ENST00000425343 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
PGC-204ENST00000425343 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
PGC-204ENST00000425343 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
PGC-204ENST00000425343 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
PGC-204ENST00000425343 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
PGC-204ENST00000425343 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
PGC-204ENST00000425343 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.91
PGC-204ENST00000425343 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
PGC-204ENST00000425343 ERICH3Q5RHP9 1530 aa20.7■□□□□ 0.9
PGC-204ENST00000425343 IGF1RP08069 1367 aa20.69■□□□□ 0.9
PGC-204ENST00000425343 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
PGC-204ENST00000425343 CUL7Q14999 1698 aa20.65■□□□□ 0.9
PGC-204ENST00000425343 KIF21BO75037 1637 aa20.62■□□□□ 0.89
PGC-204ENST00000425343 PRXQ9BXM0 1461 aa20.6■□□□□ 0.89
PGC-204ENST00000425343 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
PGC-204ENST00000425343 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
PGC-204ENST00000425343 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
PGC-204ENST00000425343 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
PGC-204ENST00000425343 FHAD1B1AJZ9 1412 aa20.54■□□□□ 0.88
PGC-204ENST00000425343 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
PGC-204ENST00000425343 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
PGC-204ENST00000425343 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
PGC-204ENST00000425343 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
PGC-204ENST00000425343 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
PGC-204ENST00000425343 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
PGC-204ENST00000425343 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
PGC-204ENST00000425343 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
PGC-204ENST00000425343 CHD1O14646 1710 aa20.39■□□□□ 0.85
PGC-204ENST00000425343 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
PGC-204ENST00000425343 FBLN2P98095 1184 aa20.38■□□□□ 0.85
PGC-204ENST00000425343 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms