RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 NISCHQ9Y2I1 1504 aa29.02■■■□□ 2.24
VSTM1-205ENST00000425006 ABCC9O60706 1549 aa27.4■■□□□ 1.98
VSTM1-205ENST00000425006 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
VSTM1-205ENST00000425006 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
VSTM1-205ENST00000425006 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
VSTM1-205ENST00000425006 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.66
VSTM1-205ENST00000425006 NACADO15069 1562 aa25.21■■□□□ 1.63
VSTM1-205ENST00000425006 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
VSTM1-205ENST00000425006 DCAF8L2P0C7V8 631 aa25■■□□□ 1.59
VSTM1-205ENST00000425006 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
VSTM1-205ENST00000425006 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
VSTM1-205ENST00000425006 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
VSTM1-205ENST00000425006 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
VSTM1-205ENST00000425006 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
VSTM1-205ENST00000425006 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
VSTM1-205ENST00000425006 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
VSTM1-205ENST00000425006 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
VSTM1-205ENST00000425006 CUX2O14529 1486 aa23.96■■□□□ 1.43
VSTM1-205ENST00000425006 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
VSTM1-205ENST00000425006 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
VSTM1-205ENST00000425006 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
VSTM1-205ENST00000425006 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
VSTM1-205ENST00000425006 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
VSTM1-205ENST00000425006 NESP48681 1621 aa23.26■■□□□ 1.31
VSTM1-205ENST00000425006 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
VSTM1-205ENST00000425006 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
VSTM1-205ENST00000425006 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
VSTM1-205ENST00000425006 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
VSTM1-205ENST00000425006 LAMC3Q9Y6N6 1575 aa22.91■■□□□ 1.26
VSTM1-205ENST00000425006 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
VSTM1-205ENST00000425006 PDS5BQ9NTI5 1447 aa22.85■■□□□ 1.25
VSTM1-205ENST00000425006 BAZ1BQ9UIG0 1483 aaKnown RBP22.85■■□□□ 1.25
VSTM1-205ENST00000425006 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
VSTM1-205ENST00000425006 BAZ1AQ9NRL2 1556 aaPredicted RBP22.77■■□□□ 1.24
VSTM1-205ENST00000425006 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
VSTM1-205ENST00000425006 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
VSTM1-205ENST00000425006 WDR62O43379 1518 aa22.65■■□□□ 1.22
VSTM1-205ENST00000425006 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
VSTM1-205ENST00000425006 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
VSTM1-205ENST00000425006 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
VSTM1-205ENST00000425006 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
VSTM1-205ENST00000425006 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
VSTM1-205ENST00000425006 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
VSTM1-205ENST00000425006 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
VSTM1-205ENST00000425006 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
VSTM1-205ENST00000425006 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
VSTM1-205ENST00000425006 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
VSTM1-205ENST00000425006 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
VSTM1-205ENST00000425006 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
VSTM1-205ENST00000425006 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
VSTM1-205ENST00000425006 CFTRP13569 1480 aa22.09■■□□□ 1.13
VSTM1-205ENST00000425006 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
VSTM1-205ENST00000425006 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
VSTM1-205ENST00000425006 WIZO95785 1651 aa22.04■■□□□ 1.12
VSTM1-205ENST00000425006 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
VSTM1-205ENST00000425006 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
VSTM1-205ENST00000425006 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
VSTM1-205ENST00000425006 CHD1O14646 1710 aa21.88■■□□□ 1.09
VSTM1-205ENST00000425006 FBLN2P98095 1184 aa21.87■■□□□ 1.09
VSTM1-205ENST00000425006 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
VSTM1-205ENST00000425006 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.07
VSTM1-205ENST00000425006 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
VSTM1-205ENST00000425006 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.06
VSTM1-205ENST00000425006 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
VSTM1-205ENST00000425006 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
VSTM1-205ENST00000425006 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
VSTM1-205ENST00000425006 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
VSTM1-205ENST00000425006 ILDR1Q86SU0 546 aaPredicted RBP21.57■■□□□ 1.04
VSTM1-205ENST00000425006 SYNJ1O43426 1573 aa21.53■■□□□ 1.04
VSTM1-205ENST00000425006 CHMP7Q8WUX9 453 aaPredicted RBP21.52■■□□□ 1.04
VSTM1-205ENST00000425006 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
VSTM1-205ENST00000425006 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
VSTM1-205ENST00000425006 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
VSTM1-205ENST00000425006 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
VSTM1-205ENST00000425006 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
VSTM1-205ENST00000425006 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
VSTM1-205ENST00000425006 SOGA1O94964 1423 aa21.4■■□□□ 1.02
VSTM1-205ENST00000425006 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
VSTM1-205ENST00000425006 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
VSTM1-205ENST00000425006 WDR97A6NE52 1622 aa21.33■■□□□ 1
VSTM1-205ENST00000425006 GRIN2BQ13224 1484 aa21.32■■□□□ 1
VSTM1-205ENST00000425006 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
VSTM1-205ENST00000425006 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
VSTM1-205ENST00000425006 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
VSTM1-205ENST00000425006 KIF13AQ9H1H9 1805 aa21.21■□□□□ 0.99
VSTM1-205ENST00000425006 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
VSTM1-205ENST00000425006 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
VSTM1-205ENST00000425006 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
VSTM1-205ENST00000425006 CUX1P39880 1505 aa21.07■□□□□ 0.96
VSTM1-205ENST00000425006 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
VSTM1-205ENST00000425006 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
VSTM1-205ENST00000425006 KDM6BO15054 1643 aa21.01■□□□□ 0.95
VSTM1-205ENST00000425006 NUP160Q12769 1436 aa20.99■□□□□ 0.95
VSTM1-205ENST00000425006 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
VSTM1-205ENST00000425006 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
VSTM1-205ENST00000425006 NPM1P06748 294 aaKnown RBP eCLIP20.94■□□□□ 0.94
VSTM1-205ENST00000425006 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
VSTM1-205ENST00000425006 DIP2BQ9P265 1576 aa20.93■□□□□ 0.94
VSTM1-205ENST00000425006 PRG4Q92954 1404 aaPredicted RBP20.9■□□□□ 0.94
VSTM1-205ENST00000425006 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms