RNA–Protein interactions for RNA: ENST00000424993.1

SNX18P3-201, Transcript of sorting nexin 18 pseudogene 3, humanhuman

BASIC

Gene SNX18P3, Length 835 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P3-201ENST00000424993 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
SNX18P3-201ENST00000424993 NISCHQ9Y2I1 1504 aa18■□□□□ 0.47
SNX18P3-201ENST00000424993 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
SNX18P3-201ENST00000424993 ABCC9O60706 1549 aa16.4■□□□□ 0.22
SNX18P3-201ENST00000424993 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
SNX18P3-201ENST00000424993 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
SNX18P3-201ENST00000424993 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
SNX18P3-201ENST00000424993 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
SNX18P3-201ENST00000424993 PHF23Q9BUL5 403 aaPredicted RBP15.34■□□□□ 0.05
SNX18P3-201ENST00000424993 NACADO15069 1562 aa15.32■□□□□ 0.04
SNX18P3-201ENST00000424993 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
SNX18P3-201ENST00000424993 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNX18P3-201ENST00000424993 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
SNX18P3-201ENST00000424993 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
SNX18P3-201ENST00000424993 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
SNX18P3-201ENST00000424993 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
SNX18P3-201ENST00000424993 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
SNX18P3-201ENST00000424993 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
SNX18P3-201ENST00000424993 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
SNX18P3-201ENST00000424993 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
SNX18P3-201ENST00000424993 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
SNX18P3-201ENST00000424993 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.05
SNX18P3-201ENST00000424993 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
SNX18P3-201ENST00000424993 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
SNX18P3-201ENST00000424993 FOXD1Q16676 465 aa14.65□□□□□ -0.06
SNX18P3-201ENST00000424993 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
SNX18P3-201ENST00000424993 CUX2O14529 1486 aa14.19□□□□□ -0.14
SNX18P3-201ENST00000424993 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
SNX18P3-201ENST00000424993 MSH5O43196 834 aa14.09□□□□□ -0.15
SNX18P3-201ENST00000424993 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
SNX18P3-201ENST00000424993 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
SNX18P3-201ENST00000424993 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
SNX18P3-201ENST00000424993 NESP48681 1621 aa14.01□□□□□ -0.17
SNX18P3-201ENST00000424993 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
SNX18P3-201ENST00000424993 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
SNX18P3-201ENST00000424993 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
SNX18P3-201ENST00000424993 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
SNX18P3-201ENST00000424993 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
SNX18P3-201ENST00000424993 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
SNX18P3-201ENST00000424993 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
SNX18P3-201ENST00000424993 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
SNX18P3-201ENST00000424993 PDS5BQ9NTI5 1447 aa13.82□□□□□ -0.2
SNX18P3-201ENST00000424993 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
SNX18P3-201ENST00000424993 WIZO95785 1651 aa13.79□□□□□ -0.2
SNX18P3-201ENST00000424993 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
SNX18P3-201ENST00000424993 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
SNX18P3-201ENST00000424993 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
SNX18P3-201ENST00000424993 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
SNX18P3-201ENST00000424993 WDR62O43379 1518 aa13.66□□□□□ -0.22
SNX18P3-201ENST00000424993 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
SNX18P3-201ENST00000424993 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
SNX18P3-201ENST00000424993 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
SNX18P3-201ENST00000424993 PIAS4Q8N2W9 510 aaPredicted RBP13.55□□□□□ -0.24
SNX18P3-201ENST00000424993 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
SNX18P3-201ENST00000424993 CFTRP13569 1480 aa13.51□□□□□ -0.25
SNX18P3-201ENST00000424993 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
SNX18P3-201ENST00000424993 URB2Q14146 1524 aaKnown RBP13.46□□□□□ -0.25
SNX18P3-201ENST00000424993 IFT140Q96RY7 1462 aa13.36□□□□□ -0.27
SNX18P3-201ENST00000424993 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
SNX18P3-201ENST00000424993 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
SNX18P3-201ENST00000424993 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
SNX18P3-201ENST00000424993 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
SNX18P3-201ENST00000424993 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
SNX18P3-201ENST00000424993 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
SNX18P3-201ENST00000424993 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
SNX18P3-201ENST00000424993 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
SNX18P3-201ENST00000424993 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
SNX18P3-201ENST00000424993 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
SNX18P3-201ENST00000424993 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
SNX18P3-201ENST00000424993 FBLN2P98095 1184 aa13.22□□□□□ -0.29
SNX18P3-201ENST00000424993 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
SNX18P3-201ENST00000424993 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.3
SNX18P3-201ENST00000424993 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
SNX18P3-201ENST00000424993 CHD1O14646 1710 aa13.17□□□□□ -0.3
SNX18P3-201ENST00000424993 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
SNX18P3-201ENST00000424993 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
SNX18P3-201ENST00000424993 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
SNX18P3-201ENST00000424993 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
SNX18P3-201ENST00000424993 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
SNX18P3-201ENST00000424993 SOGA1O94964 1423 aa13.1□□□□□ -0.31
SNX18P3-201ENST00000424993 SNAPC4Q5SXM2 1469 aa13.09□□□□□ -0.31
SNX18P3-201ENST00000424993 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
SNX18P3-201ENST00000424993 PPP6R1Q9UPN7 881 aa13.07□□□□□ -0.32
SNX18P3-201ENST00000424993 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
SNX18P3-201ENST00000424993 CUX1P39880 1505 aa13.03□□□□□ -0.32
SNX18P3-201ENST00000424993 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
SNX18P3-201ENST00000424993 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
SNX18P3-201ENST00000424993 CLASP1Q7Z460 1538 aa13.02□□□□□ -0.33
SNX18P3-201ENST00000424993 WDR97A6NE52 1622 aa13.02□□□□□ -0.33
SNX18P3-201ENST00000424993 ADRA2BP18089 450 aa13.01□□□□□ -0.33
SNX18P3-201ENST00000424993 GRIN2BQ13224 1484 aa13□□□□□ -0.33
SNX18P3-201ENST00000424993 WRNQ14191 1432 aaPredicted RBP eCLIP13□□□□□ -0.33
SNX18P3-201ENST00000424993 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
SNX18P3-201ENST00000424993 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
SNX18P3-201ENST00000424993 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
SNX18P3-201ENST00000424993 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
SNX18P3-201ENST00000424993 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
SNX18P3-201ENST00000424993 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
SNX18P3-201ENST00000424993 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
SNX18P3-201ENST00000424993 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms