RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
POLR1A-204ENST00000424089 ABCC9O60706 1549 aa20.98■□□□□ 0.95
POLR1A-204ENST00000424089 CCDC180Q9P1Z9 1646 aa20.72■□□□□ 0.91
POLR1A-204ENST00000424089 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
POLR1A-204ENST00000424089 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
POLR1A-204ENST00000424089 NACADO15069 1562 aa19.64■□□□□ 0.73
POLR1A-204ENST00000424089 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
POLR1A-204ENST00000424089 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
POLR1A-204ENST00000424089 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
POLR1A-204ENST00000424089 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
POLR1A-204ENST00000424089 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
POLR1A-204ENST00000424089 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
POLR1A-204ENST00000424089 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
POLR1A-204ENST00000424089 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
POLR1A-204ENST00000424089 CC2D2AQ9P2K1 1620 aa18.93■□□□□ 0.62
POLR1A-204ENST00000424089 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
POLR1A-204ENST00000424089 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
POLR1A-204ENST00000424089 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
POLR1A-204ENST00000424089 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
POLR1A-204ENST00000424089 CUX2O14529 1486 aa18.27■□□□□ 0.52
POLR1A-204ENST00000424089 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
POLR1A-204ENST00000424089 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
POLR1A-204ENST00000424089 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
POLR1A-204ENST00000424089 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
POLR1A-204ENST00000424089 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
POLR1A-204ENST00000424089 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
POLR1A-204ENST00000424089 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
POLR1A-204ENST00000424089 NESP48681 1621 aa17.88■□□□□ 0.45
POLR1A-204ENST00000424089 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
POLR1A-204ENST00000424089 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
POLR1A-204ENST00000424089 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
POLR1A-204ENST00000424089 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
POLR1A-204ENST00000424089 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
POLR1A-204ENST00000424089 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
POLR1A-204ENST00000424089 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
POLR1A-204ENST00000424089 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
POLR1A-204ENST00000424089 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
POLR1A-204ENST00000424089 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
POLR1A-204ENST00000424089 WDR62O43379 1518 aa17.5■□□□□ 0.39
POLR1A-204ENST00000424089 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
POLR1A-204ENST00000424089 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
POLR1A-204ENST00000424089 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
POLR1A-204ENST00000424089 WIZO95785 1651 aa17.39■□□□□ 0.37
POLR1A-204ENST00000424089 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
POLR1A-204ENST00000424089 CFTRP13569 1480 aa17.26■□□□□ 0.35
POLR1A-204ENST00000424089 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
POLR1A-204ENST00000424089 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
POLR1A-204ENST00000424089 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
POLR1A-204ENST00000424089 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
POLR1A-204ENST00000424089 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
POLR1A-204ENST00000424089 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
POLR1A-204ENST00000424089 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
POLR1A-204ENST00000424089 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
POLR1A-204ENST00000424089 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
POLR1A-204ENST00000424089 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
POLR1A-204ENST00000424089 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
POLR1A-204ENST00000424089 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
POLR1A-204ENST00000424089 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
POLR1A-204ENST00000424089 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
POLR1A-204ENST00000424089 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
POLR1A-204ENST00000424089 EIF4G3O43432 1585 aaKnown RBP16.97■□□□□ 0.31
POLR1A-204ENST00000424089 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
POLR1A-204ENST00000424089 CHD1O14646 1710 aa16.93■□□□□ 0.3
POLR1A-204ENST00000424089 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
POLR1A-204ENST00000424089 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
POLR1A-204ENST00000424089 FBLN2P98095 1184 aa16.86■□□□□ 0.29
POLR1A-204ENST00000424089 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
POLR1A-204ENST00000424089 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
POLR1A-204ENST00000424089 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.296e-12■■■■■ 50.2
POLR1A-204ENST00000424089 POLA1P09884 1462 aaPredicted RBP16.77■□□□□ 0.28
POLR1A-204ENST00000424089 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
POLR1A-204ENST00000424089 SOGA1O94964 1423 aa16.7■□□□□ 0.26
POLR1A-204ENST00000424089 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
POLR1A-204ENST00000424089 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
POLR1A-204ENST00000424089 SNAPC4Q5SXM2 1469 aa16.69■□□□□ 0.26
POLR1A-204ENST00000424089 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
POLR1A-204ENST00000424089 CLASP1Q7Z460 1538 aa16.68■□□□□ 0.26
POLR1A-204ENST00000424089 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
POLR1A-204ENST00000424089 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
POLR1A-204ENST00000424089 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
POLR1A-204ENST00000424089 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
POLR1A-204ENST00000424089 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
POLR1A-204ENST00000424089 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
POLR1A-204ENST00000424089 CUX1P39880 1505 aa16.55■□□□□ 0.24
POLR1A-204ENST00000424089 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
POLR1A-204ENST00000424089 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
POLR1A-204ENST00000424089 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
POLR1A-204ENST00000424089 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
POLR1A-204ENST00000424089 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
POLR1A-204ENST00000424089 CEP170Q5SW79 1584 aa16.36■□□□□ 0.21
POLR1A-204ENST00000424089 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
POLR1A-204ENST00000424089 ERCC6L2Q5T890 1561 aa16.35■□□□□ 0.21
POLR1A-204ENST00000424089 NUP160Q12769 1436 aa16.33■□□□□ 0.2
POLR1A-204ENST00000424089 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
POLR1A-204ENST00000424089 SHROOM2Q13796 1616 aa16.31■□□□□ 0.2
POLR1A-204ENST00000424089 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
POLR1A-204ENST00000424089 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
POLR1A-204ENST00000424089 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
POLR1A-204ENST00000424089 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
POLR1A-204ENST00000424089 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms