RNA–Protein interactions for RNA: ENST00000424069.5

SCRN3-203, Transcript of secernin 3, humanhuman

TSL 4

Gene SCRN3, Length 548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-203ENST00000424069 NISCHQ9Y2I1 1504 aa53.42■■■■■ 6.14
SCRN3-203ENST00000424069 CCDC180Q9P1Z9 1646 aa47.5■■■■■ 5.19
SCRN3-203ENST00000424069 ABCC9O60706 1549 aa46.34■■■■■ 5.01
SCRN3-203ENST00000424069 RB1CC1Q8TDY2 1594 aa44.66■■■■■ 4.74
SCRN3-203ENST00000424069 NACADO15069 1562 aa44.65■■■■■ 4.74
SCRN3-203ENST00000424069 ZCCHC6Q5VYS8 1495 aaKnown RBP44.52■■■■■ 4.72
SCRN3-203ENST00000424069 DCAF8L2P0C7V8 631 aa44.51■■■■■ 4.72
SCRN3-203ENST00000424069 MYO15BQ96JP2 1530 aa44.44■■■■■ 4.7
SCRN3-203ENST00000424069 DCAF1Q9Y4B6 1507 aa44.25■■■■■ 4.67
SCRN3-203ENST00000424069 UNC13AQ9UPW8 1703 aa43.65■■■■■ 4.58
SCRN3-203ENST00000424069 BICRAQ9NZM4 1560 aa43.32■■■■■ 4.52
SCRN3-203ENST00000424069 PABPN1Q86U42 306 aaKnown RBP eCLIP43.3■■■■■ 4.52
SCRN3-203ENST00000424069 SCRIBQ14160 1630 aa43.27■■■■■ 4.52
SCRN3-203ENST00000424069 SHROOM4Q9ULL8 1493 aa42.92■■■■■ 4.46
SCRN3-203ENST00000424069 DNAJC5BQ9UF47 199 aa42.5■■■■■ 4.39
SCRN3-203ENST00000424069 EIF4G1Q04637 1599 aaKnown RBP42.15■■■■■ 4.34
SCRN3-203ENST00000424069 CC2D2AQ9P2K1 1620 aa41.96■■■■■ 4.31
SCRN3-203ENST00000424069 CECR2Q9BXF3 1484 aa41.66■■■■■ 4.26
SCRN3-203ENST00000424069 SMARCA4P51532 1647 aa41.44■■■■■ 4.22
SCRN3-203ENST00000424069 BAZ1AQ9NRL2 1556 aaPredicted RBP41.41■■■■■ 4.22
SCRN3-203ENST00000424069 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
SCRN3-203ENST00000424069 NCAPD3P42695 1498 aa41.19■■■■■ 4.18
SCRN3-203ENST00000424069 SMARCA2P51531 1590 aa41.17■■■■■ 4.18
SCRN3-203ENST00000424069 MROH2BQ7Z745 1585 aa41.16■■■■■ 4.18
SCRN3-203ENST00000424069 PEG3Q9GZU2 1588 aa41.08■■■■■ 4.17
SCRN3-203ENST00000424069 HMGXB3Q12766 1538 aa40.99■■■■■ 4.15
SCRN3-203ENST00000424069 BAZ1BQ9UIG0 1483 aaKnown RBP40.84■■■■■ 4.13
SCRN3-203ENST00000424069 RSF1Q96T23 1441 aaPredicted RBP40.71■■■■■ 4.11
SCRN3-203ENST00000424069 WIZO95785 1651 aa40.71■■■■■ 4.11
SCRN3-203ENST00000424069 TOP2AP11388 1531 aaKnown RBP40.31■■■■■ 4.04
SCRN3-203ENST00000424069 NESP48681 1621 aa40.13■■■■■ 4.01
SCRN3-203ENST00000424069 LAMC3Q9Y6N6 1575 aa40.09■■■■■ 4.01
SCRN3-203ENST00000424069 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
SCRN3-203ENST00000424069 ERCC6Q03468 1493 aa39.94■■■■□ 3.98
SCRN3-203ENST00000424069 CCDC88BA6NC98 1476 aa39.82■■■■□ 3.97
SCRN3-203ENST00000424069 PDS5BQ9NTI5 1447 aa39.81■■■■□ 3.96
SCRN3-203ENST00000424069 CFTRP13569 1480 aa39.76■■■■□ 3.96
SCRN3-203ENST00000424069 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
SCRN3-203ENST00000424069 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
SCRN3-203ENST00000424069 CUX2O14529 1486 aa39.56■■■■□ 3.92
SCRN3-203ENST00000424069 THOC2Q8NI27 1593 aaKnown RBP39.55■■■■□ 3.92
SCRN3-203ENST00000424069 FANCD2Q9BXW9 1451 aa39.5■■■■□ 3.91
SCRN3-203ENST00000424069 PRDM2Q13029 1718 aa39.48■■■■□ 3.91
SCRN3-203ENST00000424069 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
SCRN3-203ENST00000424069 MRC2Q9UBG0 1479 aa39.38■■■■□ 3.9
SCRN3-203ENST00000424069 WDR62O43379 1518 aa39.27■■■■□ 3.88
SCRN3-203ENST00000424069 URB2Q14146 1524 aaKnown RBP39.11■■■■□ 3.85
SCRN3-203ENST00000424069 ABCC8Q09428 1581 aa38.92■■■■□ 3.82
SCRN3-203ENST00000424069 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
SCRN3-203ENST00000424069 DNMBPQ6XZF7 1577 aa38.86■■■■□ 3.81
SCRN3-203ENST00000424069 DNAJC5Q9H3Z4 198 aa38.68■■■■□ 3.78
SCRN3-203ENST00000424069 IFT140Q96RY7 1462 aa38.64■■■■□ 3.78
SCRN3-203ENST00000424069 CUX1P39880 1505 aa38.61■■■■□ 3.77
SCRN3-203ENST00000424069 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
SCRN3-203ENST00000424069 TARBP1Q13395 1621 aaKnown RBP38.48■■■■□ 3.75
SCRN3-203ENST00000424069 FGD5Q6ZNL6 1462 aa38.46■■■■□ 3.75
SCRN3-203ENST00000424069 ZNF608Q9ULD9 1512 aaPredicted RBP38.43■■■■□ 3.74
SCRN3-203ENST00000424069 SOGA1O94964 1423 aa38.39■■■■□ 3.74
SCRN3-203ENST00000424069 WRNQ14191 1432 aaPredicted RBP eCLIP38.38■■■■□ 3.73
SCRN3-203ENST00000424069 RAD54L2Q9Y4B4 1467 aa38.36■■■■□ 3.73
SCRN3-203ENST00000424069 TOP2BQ02880 1626 aa38.31■■■■□ 3.72
SCRN3-203ENST00000424069 BIVM-ERCC5R4GMW8 1640 aa38.31■■■■□ 3.72
SCRN3-203ENST00000424069 EIF4G3O43432 1585 aaKnown RBP38.29■■■■□ 3.72
SCRN3-203ENST00000424069 SYNJ1O43426 1573 aa38.27■■■■□ 3.72
SCRN3-203ENST00000424069 AQRO60306 1485 aaKnown RBP eCLIP38.22■■■■□ 3.71
SCRN3-203ENST00000424069 WDR97A6NE52 1622 aa38.21■■■■□ 3.71
SCRN3-203ENST00000424069 TDRD9Q8NDG6 1382 aaKnown RBP38.15■■■■□ 3.7
SCRN3-203ENST00000424069 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
SCRN3-203ENST00000424069 ABCA5Q8WWZ7 1642 aa37.97■■■■□ 3.67
SCRN3-203ENST00000424069 GRIN2BQ13224 1484 aa37.96■■■■□ 3.67
SCRN3-203ENST00000424069 GAPVD1Q14C86 1478 aa37.96■■■■□ 3.67
SCRN3-203ENST00000424069 OSCARQ8IYS5 282 aa37.9■■■■□ 3.66
SCRN3-203ENST00000424069 PBRM1Q86U86 1689 aa37.88■■■■□ 3.65
SCRN3-203ENST00000424069 SNAPC4Q5SXM2 1469 aa37.87■■■■□ 3.65
SCRN3-203ENST00000424069 MAGI1Q96QZ7 1491 aaPredicted RBP37.85■■■■□ 3.65
SCRN3-203ENST00000424069 CHD1O14646 1710 aa37.79■■■■□ 3.64
SCRN3-203ENST00000424069 FBLN2P98095 1184 aa37.71■■■■□ 3.63
SCRN3-203ENST00000424069 SYNJ2O15056 1496 aa37.7■■■■□ 3.63
SCRN3-203ENST00000424069 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
SCRN3-203ENST00000424069 CHMP7Q8WUX9 453 aaPredicted RBP37.65■■■■□ 3.62
SCRN3-203ENST00000424069 KIF27Q86VH2 1401 aa37.58■■■■□ 3.61
SCRN3-203ENST00000424069 ADAMTS12P58397 1594 aa37.58■■■■□ 3.61
SCRN3-203ENST00000424069 FHAD1B1AJZ9 1412 aa37.53■■■■□ 3.6
SCRN3-203ENST00000424069 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
SCRN3-203ENST00000424069 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
SCRN3-203ENST00000424069 IGF1RP08069 1367 aa37.43■■■■□ 3.58
SCRN3-203ENST00000424069 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
SCRN3-203ENST00000424069 CUL7Q14999 1698 aa37.34■■■■□ 3.57
SCRN3-203ENST00000424069 NUP160Q12769 1436 aa37.3■■■■□ 3.56
SCRN3-203ENST00000424069 RIMBP3CA6NJZ7 1639 aa37.29■■■■□ 3.56
SCRN3-203ENST00000424069 RIMBP3BA6NNM3 1639 aa37.29■■■■□ 3.56
SCRN3-203ENST00000424069 RIMBP3Q9UFD9 1639 aa37.29■■■■□ 3.56
SCRN3-203ENST00000424069 ARHGEF11O15085 1522 aa37.29■■■■□ 3.56
SCRN3-203ENST00000424069 CEP170Q5SW79 1584 aa37.26■■■■□ 3.56
SCRN3-203ENST00000424069 RUSC2Q8N2Y8 1516 aa37.22■■■■□ 3.55
SCRN3-203ENST00000424069 CARMIL1Q5VZK9 1371 aa37.19■■■■□ 3.54
SCRN3-203ENST00000424069 CHIC1Q5VXU3 224 aa37.14■■■■□ 3.54
SCRN3-203ENST00000424069 SHROOM2Q13796 1616 aa37.03■■■■□ 3.52
SCRN3-203ENST00000424069 ARAP1Q96P48 1450 aa36.99■■■■□ 3.51
SCRN3-203ENST00000424069 RAPGEF2Q9Y4G8 1499 aa36.99■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms