RNA–Protein interactions for RNA: ENST00000423616.1

RHBDD1-204, Transcript of rhomboid domain containing 1, humanhuman

TSL 5

Gene RHBDD1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-204ENST00000423616 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
RHBDD1-204ENST00000423616 ABCC9O60706 1549 aa23.3■■□□□ 1.32
RHBDD1-204ENST00000423616 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
RHBDD1-204ENST00000423616 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
RHBDD1-204ENST00000423616 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
RHBDD1-204ENST00000423616 NACADO15069 1562 aa21.64■■□□□ 1.05
RHBDD1-204ENST00000423616 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
RHBDD1-204ENST00000423616 UNC13AQ9UPW8 1703 aa21.43■■□□□ 1.02
RHBDD1-204ENST00000423616 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
RHBDD1-204ENST00000423616 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
RHBDD1-204ENST00000423616 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
RHBDD1-204ENST00000423616 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
RHBDD1-204ENST00000423616 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
RHBDD1-204ENST00000423616 SHROOM4Q9ULL8 1493 aa21.1■□□□□ 0.97
RHBDD1-204ENST00000423616 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
RHBDD1-204ENST00000423616 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
RHBDD1-204ENST00000423616 CUX2O14529 1486 aa20.54■□□□□ 0.88
RHBDD1-204ENST00000423616 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
RHBDD1-204ENST00000423616 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
RHBDD1-204ENST00000423616 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
RHBDD1-204ENST00000423616 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
RHBDD1-204ENST00000423616 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
RHBDD1-204ENST00000423616 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
RHBDD1-204ENST00000423616 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
RHBDD1-204ENST00000423616 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
RHBDD1-204ENST00000423616 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
RHBDD1-204ENST00000423616 NESP48681 1621 aa19.76■□□□□ 0.75
RHBDD1-204ENST00000423616 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
RHBDD1-204ENST00000423616 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
RHBDD1-204ENST00000423616 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
RHBDD1-204ENST00000423616 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
RHBDD1-204ENST00000423616 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
RHBDD1-204ENST00000423616 PDS5BQ9NTI5 1447 aa19.55■□□□□ 0.72
RHBDD1-204ENST00000423616 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
RHBDD1-204ENST00000423616 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
RHBDD1-204ENST00000423616 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
RHBDD1-204ENST00000423616 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
RHBDD1-204ENST00000423616 WDR62O43379 1518 aa19.41■□□□□ 0.7
RHBDD1-204ENST00000423616 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
RHBDD1-204ENST00000423616 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
RHBDD1-204ENST00000423616 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
RHBDD1-204ENST00000423616 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
RHBDD1-204ENST00000423616 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
RHBDD1-204ENST00000423616 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
RHBDD1-204ENST00000423616 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
RHBDD1-204ENST00000423616 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
RHBDD1-204ENST00000423616 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
RHBDD1-204ENST00000423616 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
RHBDD1-204ENST00000423616 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
RHBDD1-204ENST00000423616 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
RHBDD1-204ENST00000423616 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
RHBDD1-204ENST00000423616 CFTRP13569 1480 aa18.9■□□□□ 0.62
RHBDD1-204ENST00000423616 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
RHBDD1-204ENST00000423616 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
RHBDD1-204ENST00000423616 WIZO95785 1651 aa18.8■□□□□ 0.6
RHBDD1-204ENST00000423616 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
RHBDD1-204ENST00000423616 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
RHBDD1-204ENST00000423616 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
RHBDD1-204ENST00000423616 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
RHBDD1-204ENST00000423616 CHD1O14646 1710 aa18.74■□□□□ 0.59
RHBDD1-204ENST00000423616 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
RHBDD1-204ENST00000423616 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
RHBDD1-204ENST00000423616 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
RHBDD1-204ENST00000423616 FBLN2P98095 1184 aa18.53■□□□□ 0.56
RHBDD1-204ENST00000423616 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
RHBDD1-204ENST00000423616 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
RHBDD1-204ENST00000423616 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
RHBDD1-204ENST00000423616 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
RHBDD1-204ENST00000423616 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
RHBDD1-204ENST00000423616 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
RHBDD1-204ENST00000423616 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
RHBDD1-204ENST00000423616 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
RHBDD1-204ENST00000423616 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
RHBDD1-204ENST00000423616 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
RHBDD1-204ENST00000423616 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
RHBDD1-204ENST00000423616 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
RHBDD1-204ENST00000423616 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
RHBDD1-204ENST00000423616 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
RHBDD1-204ENST00000423616 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
RHBDD1-204ENST00000423616 SOGA1O94964 1423 aa18.24■□□□□ 0.51
RHBDD1-204ENST00000423616 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
RHBDD1-204ENST00000423616 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
RHBDD1-204ENST00000423616 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
RHBDD1-204ENST00000423616 PBRM1Q86U86 1689 aa18.13■□□□□ 0.49
RHBDD1-204ENST00000423616 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
RHBDD1-204ENST00000423616 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
RHBDD1-204ENST00000423616 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
RHBDD1-204ENST00000423616 KDM4FA0A1W2PPD8 638 aa18■□□□□ 0.47
RHBDD1-204ENST00000423616 SHROOM2Q13796 1616 aa18■□□□□ 0.47
RHBDD1-204ENST00000423616 KDM6BO15054 1643 aa17.99■□□□□ 0.47
RHBDD1-204ENST00000423616 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
RHBDD1-204ENST00000423616 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
RHBDD1-204ENST00000423616 CUX1P39880 1505 aa17.97■□□□□ 0.47
RHBDD1-204ENST00000423616 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
RHBDD1-204ENST00000423616 NUP160Q12769 1436 aa17.95■□□□□ 0.46
RHBDD1-204ENST00000423616 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
RHBDD1-204ENST00000423616 DIP2BQ9P265 1576 aa17.91■□□□□ 0.46
RHBDD1-204ENST00000423616 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
RHBDD1-204ENST00000423616 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
RHBDD1-204ENST00000423616 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms