RNA–Protein interactions for RNA: ENST00000423326.2

LINC01241-201, Transcript of long intergenic non-protein coding RNA 1241, humanhuman

TSL 1 (best) BASIC

Gene LINC01241, Length 1,237 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01241-201ENST00000423326 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
LINC01241-201ENST00000423326 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
LINC01241-201ENST00000423326 ABCC9O60706 1549 aa24.47■■□□□ 1.51
LINC01241-201ENST00000423326 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
LINC01241-201ENST00000423326 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
LINC01241-201ENST00000423326 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
LINC01241-201ENST00000423326 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
LINC01241-201ENST00000423326 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
LINC01241-201ENST00000423326 NACADO15069 1562 aa22.77■■□□□ 1.24
LINC01241-201ENST00000423326 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
LINC01241-201ENST00000423326 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
LINC01241-201ENST00000423326 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
LINC01241-201ENST00000423326 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
LINC01241-201ENST00000423326 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
LINC01241-201ENST00000423326 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
LINC01241-201ENST00000423326 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
LINC01241-201ENST00000423326 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
LINC01241-201ENST00000423326 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
LINC01241-201ENST00000423326 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
LINC01241-201ENST00000423326 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
LINC01241-201ENST00000423326 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
LINC01241-201ENST00000423326 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
LINC01241-201ENST00000423326 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
LINC01241-201ENST00000423326 CUX2O14529 1486 aa21.13■□□□□ 0.97
LINC01241-201ENST00000423326 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.97
LINC01241-201ENST00000423326 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
LINC01241-201ENST00000423326 NESP48681 1621 aa20.91■□□□□ 0.94
LINC01241-201ENST00000423326 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
LINC01241-201ENST00000423326 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
LINC01241-201ENST00000423326 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
LINC01241-201ENST00000423326 HMGXB3Q12766 1538 aa20.81■□□□□ 0.92
LINC01241-201ENST00000423326 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
LINC01241-201ENST00000423326 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
LINC01241-201ENST00000423326 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
LINC01241-201ENST00000423326 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
LINC01241-201ENST00000423326 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
LINC01241-201ENST00000423326 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
LINC01241-201ENST00000423326 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
LINC01241-201ENST00000423326 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
LINC01241-201ENST00000423326 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
LINC01241-201ENST00000423326 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
LINC01241-201ENST00000423326 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
LINC01241-201ENST00000423326 WIZO95785 1651 aa20.33■□□□□ 0.85
LINC01241-201ENST00000423326 WDR62O43379 1518 aa20.31■□□□□ 0.84
LINC01241-201ENST00000423326 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
LINC01241-201ENST00000423326 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
LINC01241-201ENST00000423326 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
LINC01241-201ENST00000423326 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
LINC01241-201ENST00000423326 CFTRP13569 1480 aa20.03■□□□□ 0.8
LINC01241-201ENST00000423326 RIMBP3CA6NJZ7 1639 aa20.01■□□□□ 0.79
LINC01241-201ENST00000423326 RIMBP3BA6NNM3 1639 aa20.01■□□□□ 0.79
LINC01241-201ENST00000423326 RIMBP3Q9UFD9 1639 aa20.01■□□□□ 0.79
LINC01241-201ENST00000423326 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
LINC01241-201ENST00000423326 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
LINC01241-201ENST00000423326 RSF1Q96T23 1441 aaPredicted RBP19.9■□□□□ 0.78
LINC01241-201ENST00000423326 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
LINC01241-201ENST00000423326 FOXD1Q16676 465 aa19.84■□□□□ 0.77
LINC01241-201ENST00000423326 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
LINC01241-201ENST00000423326 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
LINC01241-201ENST00000423326 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
LINC01241-201ENST00000423326 CHD1O14646 1710 aa19.79■□□□□ 0.76
LINC01241-201ENST00000423326 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
LINC01241-201ENST00000423326 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
LINC01241-201ENST00000423326 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
LINC01241-201ENST00000423326 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
LINC01241-201ENST00000423326 FBLN2P98095 1184 aa19.73■□□□□ 0.75
LINC01241-201ENST00000423326 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
LINC01241-201ENST00000423326 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
LINC01241-201ENST00000423326 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
LINC01241-201ENST00000423326 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
LINC01241-201ENST00000423326 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
LINC01241-201ENST00000423326 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
LINC01241-201ENST00000423326 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
LINC01241-201ENST00000423326 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
LINC01241-201ENST00000423326 SOGA1O94964 1423 aa19.45■□□□□ 0.7
LINC01241-201ENST00000423326 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
LINC01241-201ENST00000423326 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
LINC01241-201ENST00000423326 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
LINC01241-201ENST00000423326 CLASP1Q7Z460 1538 aa19.38■□□□□ 0.69
LINC01241-201ENST00000423326 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
LINC01241-201ENST00000423326 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
LINC01241-201ENST00000423326 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
LINC01241-201ENST00000423326 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
LINC01241-201ENST00000423326 GRIN2BQ13224 1484 aa19.29■□□□□ 0.68
LINC01241-201ENST00000423326 CUX1P39880 1505 aa19.29■□□□□ 0.68
LINC01241-201ENST00000423326 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
LINC01241-201ENST00000423326 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
LINC01241-201ENST00000423326 GAPVD1Q14C86 1478 aa19.24■□□□□ 0.67
LINC01241-201ENST00000423326 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
LINC01241-201ENST00000423326 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
LINC01241-201ENST00000423326 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
LINC01241-201ENST00000423326 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
LINC01241-201ENST00000423326 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
LINC01241-201ENST00000423326 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
LINC01241-201ENST00000423326 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
LINC01241-201ENST00000423326 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
LINC01241-201ENST00000423326 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
LINC01241-201ENST00000423326 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
LINC01241-201ENST00000423326 NUP160Q12769 1436 aa18.94■□□□□ 0.62
LINC01241-201ENST00000423326 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms