RNA–Protein interactions for RNA: ENST00000422669.1

LTBP1-208, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 5

Gene LTBP1, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-208ENST00000422669 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
LTBP1-208ENST00000422669 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
LTBP1-208ENST00000422669 ABCC9O60706 1549 aa20.46■□□□□ 0.87
LTBP1-208ENST00000422669 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
LTBP1-208ENST00000422669 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
LTBP1-208ENST00000422669 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
LTBP1-208ENST00000422669 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
LTBP1-208ENST00000422669 NACADO15069 1562 aa19.23■□□□□ 0.67
LTBP1-208ENST00000422669 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
LTBP1-208ENST00000422669 UNC13AQ9UPW8 1703 aa19.05■□□□□ 0.64
LTBP1-208ENST00000422669 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
LTBP1-208ENST00000422669 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
LTBP1-208ENST00000422669 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
LTBP1-208ENST00000422669 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
LTBP1-208ENST00000422669 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
LTBP1-208ENST00000422669 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
LTBP1-208ENST00000422669 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
LTBP1-208ENST00000422669 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
LTBP1-208ENST00000422669 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
LTBP1-208ENST00000422669 EIF4G1Q04637 1599 aaKnown RBP18.4■□□□□ 0.54
LTBP1-208ENST00000422669 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
LTBP1-208ENST00000422669 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
LTBP1-208ENST00000422669 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
LTBP1-208ENST00000422669 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
LTBP1-208ENST00000422669 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
LTBP1-208ENST00000422669 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
LTBP1-208ENST00000422669 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
LTBP1-208ENST00000422669 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
LTBP1-208ENST00000422669 CUX2O14529 1486 aa17.63■□□□□ 0.41
LTBP1-208ENST00000422669 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
LTBP1-208ENST00000422669 NESP48681 1621 aa17.55■□□□□ 0.4
LTBP1-208ENST00000422669 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
LTBP1-208ENST00000422669 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
LTBP1-208ENST00000422669 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
LTBP1-208ENST00000422669 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
LTBP1-208ENST00000422669 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
LTBP1-208ENST00000422669 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
LTBP1-208ENST00000422669 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
LTBP1-208ENST00000422669 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
LTBP1-208ENST00000422669 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
LTBP1-208ENST00000422669 WIZO95785 1651 aa17.25■□□□□ 0.35
LTBP1-208ENST00000422669 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
LTBP1-208ENST00000422669 MRC2Q9UBG0 1479 aa17.14■□□□□ 0.33
LTBP1-208ENST00000422669 WDR62O43379 1518 aa17.11■□□□□ 0.33
LTBP1-208ENST00000422669 FOXD1Q16676 465 aa17.09■□□□□ 0.33
LTBP1-208ENST00000422669 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
LTBP1-208ENST00000422669 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
LTBP1-208ENST00000422669 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
LTBP1-208ENST00000422669 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
LTBP1-208ENST00000422669 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
LTBP1-208ENST00000422669 CFTRP13569 1480 aa16.99■□□□□ 0.31
LTBP1-208ENST00000422669 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
LTBP1-208ENST00000422669 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
LTBP1-208ENST00000422669 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
LTBP1-208ENST00000422669 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
LTBP1-208ENST00000422669 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
LTBP1-208ENST00000422669 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
LTBP1-208ENST00000422669 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
LTBP1-208ENST00000422669 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
LTBP1-208ENST00000422669 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
LTBP1-208ENST00000422669 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
LTBP1-208ENST00000422669 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
LTBP1-208ENST00000422669 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
LTBP1-208ENST00000422669 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
LTBP1-208ENST00000422669 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
LTBP1-208ENST00000422669 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
LTBP1-208ENST00000422669 CHD1O14646 1710 aa16.57■□□□□ 0.24
LTBP1-208ENST00000422669 ARHGEF11O15085 1522 aa16.57■□□□□ 0.24
LTBP1-208ENST00000422669 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
LTBP1-208ENST00000422669 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
LTBP1-208ENST00000422669 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
LTBP1-208ENST00000422669 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
LTBP1-208ENST00000422669 FBLN2P98095 1184 aa16.45■□□□□ 0.22
LTBP1-208ENST00000422669 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
LTBP1-208ENST00000422669 SOGA1O94964 1423 aa16.43■□□□□ 0.22
LTBP1-208ENST00000422669 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
LTBP1-208ENST00000422669 FGD5Q6ZNL6 1462 aa16.41■□□□□ 0.22
LTBP1-208ENST00000422669 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
LTBP1-208ENST00000422669 CUX1P39880 1505 aa16.39■□□□□ 0.21
LTBP1-208ENST00000422669 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
LTBP1-208ENST00000422669 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
LTBP1-208ENST00000422669 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
LTBP1-208ENST00000422669 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
LTBP1-208ENST00000422669 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
LTBP1-208ENST00000422669 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
LTBP1-208ENST00000422669 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
LTBP1-208ENST00000422669 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
LTBP1-208ENST00000422669 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
LTBP1-208ENST00000422669 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
LTBP1-208ENST00000422669 SYNJ2O15056 1496 aa16.26■□□□□ 0.19
LTBP1-208ENST00000422669 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
LTBP1-208ENST00000422669 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
LTBP1-208ENST00000422669 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
LTBP1-208ENST00000422669 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
LTBP1-208ENST00000422669 KCNA4P22459 653 aa16.19■□□□□ 0.18
LTBP1-208ENST00000422669 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
LTBP1-208ENST00000422669 BIVM-ERCC5R4GMW8 1640 aa16.11■□□□□ 0.17
LTBP1-208ENST00000422669 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
LTBP1-208ENST00000422669 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
LTBP1-208ENST00000422669 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms