RNA–Protein interactions for RNA: ENST00000422368.5

CARF-206, Transcript of calcium responsive transcription factor, humanhuman

TSL 1 (best)

Gene CARF, Length 1,592 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-206ENST00000422368 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
CARF-206ENST00000422368 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
CARF-206ENST00000422368 ABCC9O60706 1549 aa14.89□□□□□ -0.03
CARF-206ENST00000422368 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
CARF-206ENST00000422368 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
CARF-206ENST00000422368 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
CARF-206ENST00000422368 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
CARF-206ENST00000422368 NACADO15069 1562 aa14□□□□□ -0.17
CARF-206ENST00000422368 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
CARF-206ENST00000422368 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
CARF-206ENST00000422368 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
CARF-206ENST00000422368 UNC13AQ9UPW8 1703 aa13.8□□□□□ -0.2
CARF-206ENST00000422368 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
CARF-206ENST00000422368 ZCCHC6Q5VYS8 1495 aaKnown RBP13.63□□□□□ -0.23
CARF-206ENST00000422368 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
CARF-206ENST00000422368 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
CARF-206ENST00000422368 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
CARF-206ENST00000422368 SCRIBQ14160 1630 aa13.46□□□□□ -0.25
CARF-206ENST00000422368 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
CARF-206ENST00000422368 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
CARF-206ENST00000422368 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
CARF-206ENST00000422368 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
CARF-206ENST00000422368 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
CARF-206ENST00000422368 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
CARF-206ENST00000422368 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
CARF-206ENST00000422368 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
CARF-206ENST00000422368 CUX2O14529 1486 aa12.85□□□□□ -0.35
CARF-206ENST00000422368 SMARCA4P51532 1647 aa12.85□□□□□ -0.35
CARF-206ENST00000422368 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
CARF-206ENST00000422368 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
CARF-206ENST00000422368 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
CARF-206ENST00000422368 NESP48681 1621 aa12.79□□□□□ -0.36
CARF-206ENST00000422368 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
CARF-206ENST00000422368 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
CARF-206ENST00000422368 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
CARF-206ENST00000422368 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.38
CARF-206ENST00000422368 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
CARF-206ENST00000422368 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
CARF-206ENST00000422368 FOXD1Q16676 465 aa12.58□□□□□ -0.4
CARF-206ENST00000422368 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
CARF-206ENST00000422368 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
CARF-206ENST00000422368 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
CARF-206ENST00000422368 WIZO95785 1651 aa12.53□□□□□ -0.4
CARF-206ENST00000422368 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
CARF-206ENST00000422368 WDR62O43379 1518 aa12.46□□□□□ -0.41
CARF-206ENST00000422368 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
CARF-206ENST00000422368 CFTRP13569 1480 aa12.4□□□□□ -0.42
CARF-206ENST00000422368 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
CARF-206ENST00000422368 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
CARF-206ENST00000422368 TOP2AP11388 1531 aaKnown RBP12.35□□□□□ -0.43
CARF-206ENST00000422368 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
CARF-206ENST00000422368 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
CARF-206ENST00000422368 OSCARQ8IYS5 282 aa12.27□□□□□ -0.44
CARF-206ENST00000422368 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
CARF-206ENST00000422368 MSH5O43196 834 aa12.22□□□□□ -0.45
CARF-206ENST00000422368 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
CARF-206ENST00000422368 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
CARF-206ENST00000422368 IFT140Q96RY7 1462 aa12.17□□□□□ -0.46
CARF-206ENST00000422368 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
CARF-206ENST00000422368 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CARF-206ENST00000422368 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CARF-206ENST00000422368 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CARF-206ENST00000422368 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
CARF-206ENST00000422368 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.47
CARF-206ENST00000422368 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
CARF-206ENST00000422368 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
CARF-206ENST00000422368 AQRO60306 1485 aaKnown RBP eCLIP12.06□□□□□ -0.48
CARF-206ENST00000422368 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
CARF-206ENST00000422368 POLA1P09884 1462 aaPredicted RBP12.04□□□□□ -0.48
CARF-206ENST00000422368 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
CARF-206ENST00000422368 CHD1O14646 1710 aa11.99□□□□□ -0.49
CARF-206ENST00000422368 CYB5RLQ6IPT4 315 aa11.99□□□□□ -0.49
CARF-206ENST00000422368 SOGA1O94964 1423 aa11.97□□□□□ -0.49
CARF-206ENST00000422368 TDRD9Q8NDG6 1382 aaKnown RBP11.97□□□□□ -0.49
CARF-206ENST00000422368 ARAP1Q96P48 1450 aa11.96□□□□□ -0.5
CARF-206ENST00000422368 FBLN2P98095 1184 aa11.95□□□□□ -0.5
CARF-206ENST00000422368 FGD5Q6ZNL6 1462 aa11.94□□□□□ -0.5
CARF-206ENST00000422368 CUX1P39880 1505 aa11.93□□□□□ -0.5
CARF-206ENST00000422368 SNAPC4Q5SXM2 1469 aa11.91□□□□□ -0.5
CARF-206ENST00000422368 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
CARF-206ENST00000422368 CLASP1Q7Z460 1538 aa11.89□□□□□ -0.51
CARF-206ENST00000422368 GRIN2BQ13224 1484 aa11.87□□□□□ -0.51
CARF-206ENST00000422368 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
CARF-206ENST00000422368 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
CARF-206ENST00000422368 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
CARF-206ENST00000422368 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
CARF-206ENST00000422368 SYNJ1O43426 1573 aa11.82□□□□□ -0.52
CARF-206ENST00000422368 GAPVD1Q14C86 1478 aa11.82□□□□□ -0.52
CARF-206ENST00000422368 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
CARF-206ENST00000422368 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
CARF-206ENST00000422368 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
CARF-206ENST00000422368 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
CARF-206ENST00000422368 ERCC6L2Q5T890 1561 aa11.72□□□□□ -0.53
CARF-206ENST00000422368 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
CARF-206ENST00000422368 NUP160Q12769 1436 aa11.71□□□□□ -0.53
CARF-206ENST00000422368 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
CARF-206ENST00000422368 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
CARF-206ENST00000422368 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
CARF-206ENST00000422368 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
CARF-206ENST00000422368 CEP170Q5SW79 1584 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms