RNA–Protein interactions for RNA: ENST00000421914.5

NCSTN-203, Transcript of nicastrin, humanhuman

TSL 4

Gene NCSTN, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-203ENST00000421914 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
NCSTN-203ENST00000421914 ABCC9O60706 1549 aa32.38■■■□□ 2.77
NCSTN-203ENST00000421914 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
NCSTN-203ENST00000421914 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
NCSTN-203ENST00000421914 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
NCSTN-203ENST00000421914 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
NCSTN-203ENST00000421914 NACADO15069 1562 aa29.94■■■□□ 2.38
NCSTN-203ENST00000421914 DCAF8L2P0C7V8 631 aa29.88■■■□□ 2.37
NCSTN-203ENST00000421914 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
NCSTN-203ENST00000421914 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
NCSTN-203ENST00000421914 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
NCSTN-203ENST00000421914 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
NCSTN-203ENST00000421914 CC2D2AQ9P2K1 1620 aa29.14■■■□□ 2.26
NCSTN-203ENST00000421914 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
NCSTN-203ENST00000421914 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
NCSTN-203ENST00000421914 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
NCSTN-203ENST00000421914 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
NCSTN-203ENST00000421914 ZCCHC6Q5VYS8 1495 aaKnown RBP28.57■■■□□ 2.16
NCSTN-203ENST00000421914 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
NCSTN-203ENST00000421914 CUX2O14529 1486 aa28.14■■■□□ 2.09
NCSTN-203ENST00000421914 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
NCSTN-203ENST00000421914 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
NCSTN-203ENST00000421914 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
NCSTN-203ENST00000421914 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
NCSTN-203ENST00000421914 NESP48681 1621 aa27.56■■■□□ 2
NCSTN-203ENST00000421914 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
NCSTN-203ENST00000421914 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
NCSTN-203ENST00000421914 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
NCSTN-203ENST00000421914 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
NCSTN-203ENST00000421914 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
NCSTN-203ENST00000421914 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
NCSTN-203ENST00000421914 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
NCSTN-203ENST00000421914 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
NCSTN-203ENST00000421914 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
NCSTN-203ENST00000421914 PDS5BQ9NTI5 1447 aa27.08■■□□□ 1.93
NCSTN-203ENST00000421914 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
NCSTN-203ENST00000421914 PEG3Q9GZU2 1588 aa26.91■■□□□ 1.9
NCSTN-203ENST00000421914 MRC2Q9UBG0 1479 aa26.89■■□□□ 1.9
NCSTN-203ENST00000421914 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
NCSTN-203ENST00000421914 WDR62O43379 1518 aa26.81■■□□□ 1.88
NCSTN-203ENST00000421914 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
NCSTN-203ENST00000421914 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
NCSTN-203ENST00000421914 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
NCSTN-203ENST00000421914 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
NCSTN-203ENST00000421914 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
NCSTN-203ENST00000421914 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
NCSTN-203ENST00000421914 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
NCSTN-203ENST00000421914 WIZO95785 1651 aa26.41■■□□□ 1.82
NCSTN-203ENST00000421914 URB2Q14146 1524 aaKnown RBP26.35■■□□□ 1.81
NCSTN-203ENST00000421914 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
NCSTN-203ENST00000421914 CFTRP13569 1480 aa26.31■■□□□ 1.8
NCSTN-203ENST00000421914 TRHP20396 242 aaPredicted RBP26.31■■□□□ 1.8
NCSTN-203ENST00000421914 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
NCSTN-203ENST00000421914 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
NCSTN-203ENST00000421914 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
NCSTN-203ENST00000421914 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
NCSTN-203ENST00000421914 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
NCSTN-203ENST00000421914 FBLN2P98095 1184 aa25.97■■□□□ 1.75
NCSTN-203ENST00000421914 EIF4G3O43432 1585 aaKnown RBP25.97■■□□□ 1.75
NCSTN-203ENST00000421914 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
NCSTN-203ENST00000421914 CHD1O14646 1710 aa25.94■■□□□ 1.74
NCSTN-203ENST00000421914 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
NCSTN-203ENST00000421914 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
NCSTN-203ENST00000421914 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.737e-7■■■■□ 19.8
NCSTN-203ENST00000421914 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
NCSTN-203ENST00000421914 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
NCSTN-203ENST00000421914 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
NCSTN-203ENST00000421914 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
NCSTN-203ENST00000421914 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
NCSTN-203ENST00000421914 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
NCSTN-203ENST00000421914 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
NCSTN-203ENST00000421914 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
NCSTN-203ENST00000421914 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
NCSTN-203ENST00000421914 SNAPC4Q5SXM2 1469 aa25.56■■□□□ 1.68
NCSTN-203ENST00000421914 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
NCSTN-203ENST00000421914 SOGA1O94964 1423 aa25.52■■□□□ 1.68
NCSTN-203ENST00000421914 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
NCSTN-203ENST00000421914 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
NCSTN-203ENST00000421914 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
NCSTN-203ENST00000421914 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
NCSTN-203ENST00000421914 GRIN2BQ13224 1484 aa25.35■■□□□ 1.65
NCSTN-203ENST00000421914 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
NCSTN-203ENST00000421914 ERCC6L2Q5T890 1561 aa25.18■■□□□ 1.62
NCSTN-203ENST00000421914 CUX1P39880 1505 aa25.18■■□□□ 1.62
NCSTN-203ENST00000421914 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
NCSTN-203ENST00000421914 ILDR1Q86SU0 546 aaPredicted RBP25.05■■□□□ 1.6
NCSTN-203ENST00000421914 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
NCSTN-203ENST00000421914 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
NCSTN-203ENST00000421914 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
NCSTN-203ENST00000421914 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
NCSTN-203ENST00000421914 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
NCSTN-203ENST00000421914 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
NCSTN-203ENST00000421914 NUP160Q12769 1436 aa24.94■■□□□ 1.58
NCSTN-203ENST00000421914 KDM4FA0A1W2PPD8 638 aa24.92■■□□□ 1.58
NCSTN-203ENST00000421914 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
NCSTN-203ENST00000421914 ADAMTS12P58397 1594 aa24.89■■□□□ 1.58
NCSTN-203ENST00000421914 PRG4Q92954 1404 aaPredicted RBP24.85■■□□□ 1.57
NCSTN-203ENST00000421914 NPM1P06748 294 aaKnown RBP eCLIP24.84■■□□□ 1.57
NCSTN-203ENST00000421914 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
NCSTN-203ENST00000421914 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms