RNA–Protein interactions for RNA: ENST00000421736.1

PLOD3-203, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-203ENST00000421736 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.27
PLOD3-203ENST00000421736 CCDC180Q9P1Z9 1646 aa37.06■■■■□ 3.52
PLOD3-203ENST00000421736 ABCC9O60706 1549 aa36.26■■■■□ 3.4
PLOD3-203ENST00000421736 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
PLOD3-203ENST00000421736 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
PLOD3-203ENST00000421736 NACADO15069 1562 aa34.79■■■■□ 3.16
PLOD3-203ENST00000421736 ZCCHC6Q5VYS8 1495 aaKnown RBP34.76■■■■□ 3.15
PLOD3-203ENST00000421736 MYO15BQ96JP2 1530 aa34.55■■■■□ 3.12
PLOD3-203ENST00000421736 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.1
PLOD3-203ENST00000421736 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
PLOD3-203ENST00000421736 SCRIBQ14160 1630 aa33.89■■■■□ 3.02
PLOD3-203ENST00000421736 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
PLOD3-203ENST00000421736 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
PLOD3-203ENST00000421736 SHROOM4Q9ULL8 1493 aa33.37■■■□□ 2.93
PLOD3-203ENST00000421736 DNAJC5BQ9UF47 199 aa33.25■■■□□ 2.91
PLOD3-203ENST00000421736 EIF4G1Q04637 1599 aaKnown RBP32.93■■■□□ 2.86
PLOD3-203ENST00000421736 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
PLOD3-203ENST00000421736 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
PLOD3-203ENST00000421736 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
PLOD3-203ENST00000421736 BAZ1AQ9NRL2 1556 aaPredicted RBP32.29■■■□□ 2.76
PLOD3-203ENST00000421736 MROH2BQ7Z745 1585 aa32.18■■■□□ 2.74
PLOD3-203ENST00000421736 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
PLOD3-203ENST00000421736 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
PLOD3-203ENST00000421736 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
PLOD3-203ENST00000421736 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
PLOD3-203ENST00000421736 HMGXB3Q12766 1538 aa31.97■■■□□ 2.71
PLOD3-203ENST00000421736 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
PLOD3-203ENST00000421736 WIZO95785 1651 aa31.86■■■□□ 2.69
PLOD3-203ENST00000421736 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
PLOD3-203ENST00000421736 TOP2AP11388 1531 aaKnown RBP31.47■■■□□ 2.63
PLOD3-203ENST00000421736 NESP48681 1621 aa31.42■■■□□ 2.62
PLOD3-203ENST00000421736 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
PLOD3-203ENST00000421736 ERCC6Q03468 1493 aa31.2■■■□□ 2.58
PLOD3-203ENST00000421736 CADPSQ9ULU8 1353 aa31.16■■■□□ 2.58
PLOD3-203ENST00000421736 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
PLOD3-203ENST00000421736 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
PLOD3-203ENST00000421736 SUPT5HO00267 1087 aaKnown RBP31.01■■■□□ 2.55
PLOD3-203ENST00000421736 CFTRP13569 1480 aa31.01■■■□□ 2.55
PLOD3-203ENST00000421736 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
PLOD3-203ENST00000421736 THOC2Q8NI27 1593 aaKnown RBP30.93■■■□□ 2.54
PLOD3-203ENST00000421736 PRDM2Q13029 1718 aa30.85■■■□□ 2.53
PLOD3-203ENST00000421736 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
PLOD3-203ENST00000421736 CUX2O14529 1486 aa30.82■■■□□ 2.53
PLOD3-203ENST00000421736 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
PLOD3-203ENST00000421736 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
PLOD3-203ENST00000421736 WDR62O43379 1518 aa30.66■■■□□ 2.5
PLOD3-203ENST00000421736 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.49
PLOD3-203ENST00000421736 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
PLOD3-203ENST00000421736 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
PLOD3-203ENST00000421736 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
PLOD3-203ENST00000421736 CUX1P39880 1505 aa30.18■■■□□ 2.42
PLOD3-203ENST00000421736 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
PLOD3-203ENST00000421736 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
PLOD3-203ENST00000421736 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
PLOD3-203ENST00000421736 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
PLOD3-203ENST00000421736 FGD5Q6ZNL6 1462 aa30.06■■■□□ 2.4
PLOD3-203ENST00000421736 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.4
PLOD3-203ENST00000421736 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
PLOD3-203ENST00000421736 EIF4G3O43432 1585 aaKnown RBP29.95■■■□□ 2.39
PLOD3-203ENST00000421736 SOGA1O94964 1423 aa29.95■■■□□ 2.38
PLOD3-203ENST00000421736 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
PLOD3-203ENST00000421736 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
PLOD3-203ENST00000421736 TOP2BQ02880 1626 aa29.91■■■□□ 2.38
PLOD3-203ENST00000421736 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.373e-7■■■■■ 29.4
PLOD3-203ENST00000421736 WDR97A6NE52 1622 aa29.86■■■□□ 2.37
PLOD3-203ENST00000421736 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
PLOD3-203ENST00000421736 TDRD9Q8NDG6 1382 aaKnown RBP29.81■■■□□ 2.36
PLOD3-203ENST00000421736 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
PLOD3-203ENST00000421736 ABCA5Q8WWZ7 1642 aa29.67■■■□□ 2.34
PLOD3-203ENST00000421736 PBRM1Q86U86 1689 aa29.64■■■□□ 2.34
PLOD3-203ENST00000421736 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
PLOD3-203ENST00000421736 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
PLOD3-203ENST00000421736 CHD1O14646 1710 aa29.6■■■□□ 2.33
PLOD3-203ENST00000421736 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
PLOD3-203ENST00000421736 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
PLOD3-203ENST00000421736 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
PLOD3-203ENST00000421736 FBLN2P98095 1184 aa29.46■■■□□ 2.31
PLOD3-203ENST00000421736 SYNJ2O15056 1496 aa29.41■■■□□ 2.3
PLOD3-203ENST00000421736 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
PLOD3-203ENST00000421736 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
PLOD3-203ENST00000421736 CHMP7Q8WUX9 453 aaPredicted RBP29.35■■■□□ 2.29
PLOD3-203ENST00000421736 KIF27Q86VH2 1401 aa29.28■■■□□ 2.28
PLOD3-203ENST00000421736 FHAD1B1AJZ9 1412 aa29.26■■■□□ 2.27
PLOD3-203ENST00000421736 GRIN2AQ12879 1464 aa29.24■■■□□ 2.27
PLOD3-203ENST00000421736 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
PLOD3-203ENST00000421736 CLASP1Q7Z460 1538 aa29.23■■■□□ 2.27
PLOD3-203ENST00000421736 IGF1RP08069 1367 aa29.19■■■□□ 2.26
PLOD3-203ENST00000421736 RIMBP3CA6NJZ7 1639 aa29.17■■■□□ 2.26
PLOD3-203ENST00000421736 RIMBP3BA6NNM3 1639 aa29.17■■■□□ 2.26
PLOD3-203ENST00000421736 RIMBP3Q9UFD9 1639 aa29.17■■■□□ 2.26
PLOD3-203ENST00000421736 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
PLOD3-203ENST00000421736 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
PLOD3-203ENST00000421736 ARHGEF11O15085 1522 aa29.14■■■□□ 2.25
PLOD3-203ENST00000421736 CUL7Q14999 1698 aa29.13■■■□□ 2.25
PLOD3-203ENST00000421736 NUP160Q12769 1436 aa29.1■■■□□ 2.25
PLOD3-203ENST00000421736 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.23
PLOD3-203ENST00000421736 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
PLOD3-203ENST00000421736 ARAP1Q96P48 1450 aa28.92■■■□□ 2.22
PLOD3-203ENST00000421736 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
PLOD3-203ENST00000421736 ERCC6L2Q5T890 1561 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms