RNA–Protein interactions for RNA: ENST00000421733.1

HOTTIP-201, HOXA distal transcript antisense RNA, humanhuman

TSL 5

Gene HOTTIP, Length 781 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTTIP-201ENST00000421733 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
HOTTIP-201ENST00000421733 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
HOTTIP-201ENST00000421733 ABCC9O60706 1549 aa21.14■□□□□ 0.98
HOTTIP-201ENST00000421733 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
HOTTIP-201ENST00000421733 NACADO15069 1562 aa20.35■□□□□ 0.85
HOTTIP-201ENST00000421733 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
HOTTIP-201ENST00000421733 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
HOTTIP-201ENST00000421733 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
HOTTIP-201ENST00000421733 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
HOTTIP-201ENST00000421733 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
HOTTIP-201ENST00000421733 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
HOTTIP-201ENST00000421733 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
HOTTIP-201ENST00000421733 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
HOTTIP-201ENST00000421733 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
HOTTIP-201ENST00000421733 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
HOTTIP-201ENST00000421733 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
HOTTIP-201ENST00000421733 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
HOTTIP-201ENST00000421733 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
HOTTIP-201ENST00000421733 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
HOTTIP-201ENST00000421733 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
HOTTIP-201ENST00000421733 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
HOTTIP-201ENST00000421733 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
HOTTIP-201ENST00000421733 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
HOTTIP-201ENST00000421733 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
HOTTIP-201ENST00000421733 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
HOTTIP-201ENST00000421733 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
HOTTIP-201ENST00000421733 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
HOTTIP-201ENST00000421733 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
HOTTIP-201ENST00000421733 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.57
HOTTIP-201ENST00000421733 WIZO95785 1651 aa18.44■□□□□ 0.54
HOTTIP-201ENST00000421733 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
HOTTIP-201ENST00000421733 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
HOTTIP-201ENST00000421733 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
HOTTIP-201ENST00000421733 NESP48681 1621 aa18.27■□□□□ 0.51
HOTTIP-201ENST00000421733 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
HOTTIP-201ENST00000421733 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
HOTTIP-201ENST00000421733 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
HOTTIP-201ENST00000421733 CUX2O14529 1486 aa18.14■□□□□ 0.49
HOTTIP-201ENST00000421733 CFTRP13569 1480 aa18.08■□□□□ 0.49
HOTTIP-201ENST00000421733 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
HOTTIP-201ENST00000421733 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
HOTTIP-201ENST00000421733 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
HOTTIP-201ENST00000421733 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
HOTTIP-201ENST00000421733 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
HOTTIP-201ENST00000421733 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
HOTTIP-201ENST00000421733 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
HOTTIP-201ENST00000421733 WDR62O43379 1518 aa17.93■□□□□ 0.46
HOTTIP-201ENST00000421733 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
HOTTIP-201ENST00000421733 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
HOTTIP-201ENST00000421733 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
HOTTIP-201ENST00000421733 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
HOTTIP-201ENST00000421733 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
HOTTIP-201ENST00000421733 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
HOTTIP-201ENST00000421733 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
HOTTIP-201ENST00000421733 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
HOTTIP-201ENST00000421733 CUX1P39880 1505 aa17.52■□□□□ 0.39
HOTTIP-201ENST00000421733 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
HOTTIP-201ENST00000421733 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
HOTTIP-201ENST00000421733 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
HOTTIP-201ENST00000421733 SOGA1O94964 1423 aa17.45■□□□□ 0.38
HOTTIP-201ENST00000421733 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
HOTTIP-201ENST00000421733 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
HOTTIP-201ENST00000421733 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
HOTTIP-201ENST00000421733 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
HOTTIP-201ENST00000421733 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
HOTTIP-201ENST00000421733 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
HOTTIP-201ENST00000421733 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
HOTTIP-201ENST00000421733 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
HOTTIP-201ENST00000421733 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
HOTTIP-201ENST00000421733 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
HOTTIP-201ENST00000421733 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
HOTTIP-201ENST00000421733 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
HOTTIP-201ENST00000421733 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
HOTTIP-201ENST00000421733 ABCA5Q8WWZ7 1642 aa17.26■□□□□ 0.35
HOTTIP-201ENST00000421733 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
HOTTIP-201ENST00000421733 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
HOTTIP-201ENST00000421733 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
HOTTIP-201ENST00000421733 CHD1O14646 1710 aa17.22■□□□□ 0.35
HOTTIP-201ENST00000421733 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
HOTTIP-201ENST00000421733 FBLN2P98095 1184 aa17.16■□□□□ 0.34
HOTTIP-201ENST00000421733 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
HOTTIP-201ENST00000421733 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
HOTTIP-201ENST00000421733 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
HOTTIP-201ENST00000421733 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
HOTTIP-201ENST00000421733 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
HOTTIP-201ENST00000421733 FHAD1B1AJZ9 1412 aa17.06■□□□□ 0.32
HOTTIP-201ENST00000421733 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
HOTTIP-201ENST00000421733 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
HOTTIP-201ENST00000421733 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
HOTTIP-201ENST00000421733 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
HOTTIP-201ENST00000421733 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
HOTTIP-201ENST00000421733 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
HOTTIP-201ENST00000421733 NUP160Q12769 1436 aa16.99■□□□□ 0.31
HOTTIP-201ENST00000421733 IGF1RP08069 1367 aa16.96■□□□□ 0.31
HOTTIP-201ENST00000421733 CUL7Q14999 1698 aa16.96■□□□□ 0.31
HOTTIP-201ENST00000421733 CEP170Q5SW79 1584 aa16.95■□□□□ 0.3
HOTTIP-201ENST00000421733 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
HOTTIP-201ENST00000421733 ARAP1Q96P48 1450 aa16.91■□□□□ 0.3
HOTTIP-201ENST00000421733 SHROOM2Q13796 1616 aa16.86■□□□□ 0.29
HOTTIP-201ENST00000421733 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms