RNA–Protein interactions for RNA: ENST00000421350.1

MICA-208, Transcript of MHC class I polypeptide-related sequence A, humanhuman

TSL 5

Gene MICA, Length 1,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MICA-208ENST00000421350 NISCHQ9Y2I1 1504 aa27.94■■■□□ 2.06
MICA-208ENST00000421350 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
MICA-208ENST00000421350 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
MICA-208ENST00000421350 ABCC9O60706 1549 aa24.86■■□□□ 1.57
MICA-208ENST00000421350 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
MICA-208ENST00000421350 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
MICA-208ENST00000421350 DCAF8L2P0C7V8 631 aa23.65■■□□□ 1.38
MICA-208ENST00000421350 NACADO15069 1562 aa23.61■■□□□ 1.37
MICA-208ENST00000421350 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
MICA-208ENST00000421350 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
MICA-208ENST00000421350 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
MICA-208ENST00000421350 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
MICA-208ENST00000421350 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
MICA-208ENST00000421350 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
MICA-208ENST00000421350 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
MICA-208ENST00000421350 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
MICA-208ENST00000421350 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
MICA-208ENST00000421350 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
MICA-208ENST00000421350 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
MICA-208ENST00000421350 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
MICA-208ENST00000421350 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
MICA-208ENST00000421350 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
MICA-208ENST00000421350 SMARCA4P51532 1647 aa21.77■■□□□ 1.07
MICA-208ENST00000421350 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
MICA-208ENST00000421350 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
MICA-208ENST00000421350 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
MICA-208ENST00000421350 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
MICA-208ENST00000421350 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
MICA-208ENST00000421350 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.04
MICA-208ENST00000421350 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
MICA-208ENST00000421350 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
MICA-208ENST00000421350 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
MICA-208ENST00000421350 NESP48681 1621 aa21.39■■□□□ 1.01
MICA-208ENST00000421350 CUX2O14529 1486 aa21.34■■□□□ 1.01
MICA-208ENST00000421350 WIZO95785 1651 aa21.29■■□□□ 1
MICA-208ENST00000421350 LAMC3Q9Y6N6 1575 aa21.27■□□□□ 0.99
MICA-208ENST00000421350 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
MICA-208ENST00000421350 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
MICA-208ENST00000421350 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
MICA-208ENST00000421350 DNAJC5Q9H3Z4 198 aa21.13■□□□□ 0.97
MICA-208ENST00000421350 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
MICA-208ENST00000421350 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
MICA-208ENST00000421350 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
MICA-208ENST00000421350 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
MICA-208ENST00000421350 CFTRP13569 1480 aa20.93■□□□□ 0.94
MICA-208ENST00000421350 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
MICA-208ENST00000421350 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
MICA-208ENST00000421350 WDR62O43379 1518 aa20.88■□□□□ 0.93
MICA-208ENST00000421350 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
MICA-208ENST00000421350 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
MICA-208ENST00000421350 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
MICA-208ENST00000421350 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
MICA-208ENST00000421350 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
MICA-208ENST00000421350 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
MICA-208ENST00000421350 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
MICA-208ENST00000421350 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
MICA-208ENST00000421350 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
MICA-208ENST00000421350 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
MICA-208ENST00000421350 FOXD1Q16676 465 aa20.41■□□□□ 0.86
MICA-208ENST00000421350 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
MICA-208ENST00000421350 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
MICA-208ENST00000421350 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
MICA-208ENST00000421350 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
MICA-208ENST00000421350 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.848e-7■■■□□ 16.1
MICA-208ENST00000421350 SOGA1O94964 1423 aa20.27■□□□□ 0.83
MICA-208ENST00000421350 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
MICA-208ENST00000421350 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
MICA-208ENST00000421350 CUX1P39880 1505 aa20.22■□□□□ 0.83
MICA-208ENST00000421350 FBLN2P98095 1184 aa20.2■□□□□ 0.82
MICA-208ENST00000421350 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
MICA-208ENST00000421350 CHD1O14646 1710 aa20.15■□□□□ 0.82
MICA-208ENST00000421350 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
MICA-208ENST00000421350 RIMBP3CA6NJZ7 1639 aa20.1■□□□□ 0.81
MICA-208ENST00000421350 RIMBP3BA6NNM3 1639 aa20.1■□□□□ 0.81
MICA-208ENST00000421350 RIMBP3Q9UFD9 1639 aa20.1■□□□□ 0.81
MICA-208ENST00000421350 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
MICA-208ENST00000421350 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
MICA-208ENST00000421350 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
MICA-208ENST00000421350 CHMP7Q8WUX9 453 aaPredicted RBP20.05■□□□□ 0.8
MICA-208ENST00000421350 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
MICA-208ENST00000421350 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
MICA-208ENST00000421350 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
MICA-208ENST00000421350 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
MICA-208ENST00000421350 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
MICA-208ENST00000421350 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
MICA-208ENST00000421350 SYNJ2O15056 1496 aa19.97■□□□□ 0.79
MICA-208ENST00000421350 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
MICA-208ENST00000421350 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
MICA-208ENST00000421350 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
MICA-208ENST00000421350 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
MICA-208ENST00000421350 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
MICA-208ENST00000421350 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
MICA-208ENST00000421350 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
MICA-208ENST00000421350 ADAMTS12P58397 1594 aa19.79■□□□□ 0.76
MICA-208ENST00000421350 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
MICA-208ENST00000421350 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
MICA-208ENST00000421350 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
MICA-208ENST00000421350 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
MICA-208ENST00000421350 NUP160Q12769 1436 aa19.69■□□□□ 0.74
MICA-208ENST00000421350 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms