RNA–Protein interactions for RNA: ENST00000421336.1

HNRNPA1P49-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 49, humanhuman

BASIC

Gene HNRNPA1P49, Length 904 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P49-201ENST00000421336 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
HNRNPA1P49-201ENST00000421336 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
HNRNPA1P49-201ENST00000421336 ABCC9O60706 1549 aa25.17■■□□□ 1.62
HNRNPA1P49-201ENST00000421336 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
HNRNPA1P49-201ENST00000421336 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
HNRNPA1P49-201ENST00000421336 NACADO15069 1562 aa23.81■■□□□ 1.4
HNRNPA1P49-201ENST00000421336 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
HNRNPA1P49-201ENST00000421336 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
HNRNPA1P49-201ENST00000421336 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
HNRNPA1P49-201ENST00000421336 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
HNRNPA1P49-201ENST00000421336 UNC13AQ9UPW8 1703 aa23.37■■□□□ 1.33
HNRNPA1P49-201ENST00000421336 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
HNRNPA1P49-201ENST00000421336 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
HNRNPA1P49-201ENST00000421336 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
HNRNPA1P49-201ENST00000421336 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
HNRNPA1P49-201ENST00000421336 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
HNRNPA1P49-201ENST00000421336 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
HNRNPA1P49-201ENST00000421336 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
HNRNPA1P49-201ENST00000421336 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
HNRNPA1P49-201ENST00000421336 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
HNRNPA1P49-201ENST00000421336 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
HNRNPA1P49-201ENST00000421336 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
HNRNPA1P49-201ENST00000421336 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
HNRNPA1P49-201ENST00000421336 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
HNRNPA1P49-201ENST00000421336 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
HNRNPA1P49-201ENST00000421336 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
HNRNPA1P49-201ENST00000421336 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
HNRNPA1P49-201ENST00000421336 NESP48681 1621 aa21.7■■□□□ 1.06
HNRNPA1P49-201ENST00000421336 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
HNRNPA1P49-201ENST00000421336 WIZO95785 1651 aa21.59■■□□□ 1.05
HNRNPA1P49-201ENST00000421336 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
HNRNPA1P49-201ENST00000421336 CUX2O14529 1486 aa21.49■■□□□ 1.03
HNRNPA1P49-201ENST00000421336 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
HNRNPA1P49-201ENST00000421336 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
HNRNPA1P49-201ENST00000421336 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
HNRNPA1P49-201ENST00000421336 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1.01
HNRNPA1P49-201ENST00000421336 KIF21AQ7Z4S6 1674 aa21.33■■□□□ 1
HNRNPA1P49-201ENST00000421336 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
HNRNPA1P49-201ENST00000421336 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
HNRNPA1P49-201ENST00000421336 CFTRP13569 1480 aa21.19■□□□□ 0.98
HNRNPA1P49-201ENST00000421336 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
HNRNPA1P49-201ENST00000421336 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
HNRNPA1P49-201ENST00000421336 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
HNRNPA1P49-201ENST00000421336 WDR62O43379 1518 aa21.12■□□□□ 0.97
HNRNPA1P49-201ENST00000421336 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
HNRNPA1P49-201ENST00000421336 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
HNRNPA1P49-201ENST00000421336 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
HNRNPA1P49-201ENST00000421336 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
HNRNPA1P49-201ENST00000421336 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
HNRNPA1P49-201ENST00000421336 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
HNRNPA1P49-201ENST00000421336 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
HNRNPA1P49-201ENST00000421336 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
HNRNPA1P49-201ENST00000421336 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
HNRNPA1P49-201ENST00000421336 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
HNRNPA1P49-201ENST00000421336 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 CUX1P39880 1505 aa20.53■□□□□ 0.88
HNRNPA1P49-201ENST00000421336 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
HNRNPA1P49-201ENST00000421336 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
HNRNPA1P49-201ENST00000421336 SOGA1O94964 1423 aa20.48■□□□□ 0.87
HNRNPA1P49-201ENST00000421336 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
HNRNPA1P49-201ENST00000421336 FBLN2P98095 1184 aa20.34■□□□□ 0.85
HNRNPA1P49-201ENST00000421336 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
HNRNPA1P49-201ENST00000421336 CHD1O14646 1710 aa20.31■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
HNRNPA1P49-201ENST00000421336 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 ABCA10Q8WWZ4 1543 aa20.25■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
HNRNPA1P49-201ENST00000421336 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
HNRNPA1P49-201ENST00000421336 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
HNRNPA1P49-201ENST00000421336 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
HNRNPA1P49-201ENST00000421336 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
HNRNPA1P49-201ENST00000421336 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
HNRNPA1P49-201ENST00000421336 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
HNRNPA1P49-201ENST00000421336 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
HNRNPA1P49-201ENST00000421336 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
HNRNPA1P49-201ENST00000421336 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
HNRNPA1P49-201ENST00000421336 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
HNRNPA1P49-201ENST00000421336 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
HNRNPA1P49-201ENST00000421336 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
HNRNPA1P49-201ENST00000421336 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
HNRNPA1P49-201ENST00000421336 NUP160Q12769 1436 aa19.95■□□□□ 0.78
HNRNPA1P49-201ENST00000421336 ERCC6L2Q5T890 1561 aa19.93■□□□□ 0.78
HNRNPA1P49-201ENST00000421336 IGF1RP08069 1367 aa19.83■□□□□ 0.76
HNRNPA1P49-201ENST00000421336 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
HNRNPA1P49-201ENST00000421336 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
HNRNPA1P49-201ENST00000421336 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
HNRNPA1P49-201ENST00000421336 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms