RNA–Protein interactions for RNA: ENST00000421249.2

VIRMA-202, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 1 (best) BASIC

Gene VIRMA, Length 3,924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-202ENST00000421249 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
VIRMA-202ENST00000421249 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
VIRMA-202ENST00000421249 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
VIRMA-202ENST00000421249 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
VIRMA-202ENST00000421249 ABCC9O60706 1549 aa13.34□□□□□ -0.27
VIRMA-202ENST00000421249 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
VIRMA-202ENST00000421249 NACADO15069 1562 aa13.19□□□□□ -0.3
VIRMA-202ENST00000421249 RB1CC1Q8TDY2 1594 aa13.1□□□□□ -0.31
VIRMA-202ENST00000421249 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
VIRMA-202ENST00000421249 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
VIRMA-202ENST00000421249 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
VIRMA-202ENST00000421249 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
VIRMA-202ENST00000421249 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
VIRMA-202ENST00000421249 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
VIRMA-202ENST00000421249 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
VIRMA-202ENST00000421249 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
VIRMA-202ENST00000421249 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
VIRMA-202ENST00000421249 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
VIRMA-202ENST00000421249 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
VIRMA-202ENST00000421249 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
VIRMA-202ENST00000421249 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
VIRMA-202ENST00000421249 WIZO95785 1651 aa12.29□□□□□ -0.44
VIRMA-202ENST00000421249 CC2D2AQ9P2K1 1620 aa12.21□□□□□ -0.45
VIRMA-202ENST00000421249 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
VIRMA-202ENST00000421249 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
VIRMA-202ENST00000421249 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
VIRMA-202ENST00000421249 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
VIRMA-202ENST00000421249 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
VIRMA-202ENST00000421249 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
VIRMA-202ENST00000421249 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
VIRMA-202ENST00000421249 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
VIRMA-202ENST00000421249 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
VIRMA-202ENST00000421249 PRDM2Q13029 1718 aa11.95□□□□□ -0.5
VIRMA-202ENST00000421249 CFTRP13569 1480 aa11.81□□□□□ -0.52
VIRMA-202ENST00000421249 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
VIRMA-202ENST00000421249 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
VIRMA-202ENST00000421249 NESP48681 1621 aa11.71□□□□□ -0.53
VIRMA-202ENST00000421249 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
VIRMA-202ENST00000421249 BIVM-ERCC5R4GMW8 1640 aa11.66□□□□□ -0.54
VIRMA-202ENST00000421249 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
VIRMA-202ENST00000421249 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
VIRMA-202ENST00000421249 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
VIRMA-202ENST00000421249 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
VIRMA-202ENST00000421249 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
VIRMA-202ENST00000421249 CUX1P39880 1505 aa11.59□□□□□ -0.55
VIRMA-202ENST00000421249 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
VIRMA-202ENST00000421249 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
VIRMA-202ENST00000421249 DNMBPQ6XZF7 1577 aa11.56□□□□□ -0.56
VIRMA-202ENST00000421249 URB2Q14146 1524 aaKnown RBP11.54□□□□□ -0.56
VIRMA-202ENST00000421249 WDR62O43379 1518 aa11.54□□□□□ -0.56
VIRMA-202ENST00000421249 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
VIRMA-202ENST00000421249 CHIC1Q5VXU3 224 aa11.53□□□□□ -0.56
VIRMA-202ENST00000421249 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
VIRMA-202ENST00000421249 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
VIRMA-202ENST00000421249 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
VIRMA-202ENST00000421249 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.58
VIRMA-202ENST00000421249 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
VIRMA-202ENST00000421249 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
VIRMA-202ENST00000421249 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
VIRMA-202ENST00000421249 CUX2O14529 1486 aa11.41□□□□□ -0.58
VIRMA-202ENST00000421249 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
VIRMA-202ENST00000421249 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
VIRMA-202ENST00000421249 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
VIRMA-202ENST00000421249 PBRM1Q86U86 1689 aa11.34□□□□□ -0.59
VIRMA-202ENST00000421249 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
VIRMA-202ENST00000421249 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
VIRMA-202ENST00000421249 SOGA1O94964 1423 aa11.33□□□□□ -0.6
VIRMA-202ENST00000421249 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
VIRMA-202ENST00000421249 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
VIRMA-202ENST00000421249 EEA1Q15075 1411 aa11.29□□□□□ -0.6
VIRMA-202ENST00000421249 KIF21BO75037 1637 aa11.27□□□□□ -0.61
VIRMA-202ENST00000421249 CUL7Q14999 1698 aa11.26□□□□□ -0.61
VIRMA-202ENST00000421249 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
VIRMA-202ENST00000421249 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
VIRMA-202ENST00000421249 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
VIRMA-202ENST00000421249 PRXQ9BXM0 1461 aa11.22□□□□□ -0.61
VIRMA-202ENST00000421249 GAPVD1Q14C86 1478 aa11.22□□□□□ -0.61
VIRMA-202ENST00000421249 ADAMTS12P58397 1594 aa11.22□□□□□ -0.61
VIRMA-202ENST00000421249 HRCP23327 699 aa11.2□□□□□ -0.62
VIRMA-202ENST00000421249 IGF1RP08069 1367 aa11.2□□□□□ -0.62
VIRMA-202ENST00000421249 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■■■□ 25.1
VIRMA-202ENST00000421249 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
VIRMA-202ENST00000421249 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
VIRMA-202ENST00000421249 CTTNBP2Q8WZ74 1663 aa11.15□□□□□ -0.62
VIRMA-202ENST00000421249 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
VIRMA-202ENST00000421249 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
VIRMA-202ENST00000421249 RAPGEF2Q9Y4G8 1499 aa11.13□□□□□ -0.63
VIRMA-202ENST00000421249 CHD1O14646 1710 aa11.13□□□□□ -0.63
VIRMA-202ENST00000421249 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
VIRMA-202ENST00000421249 GOLGA3Q08378 1498 aa11.11□□□□□ -0.63
VIRMA-202ENST00000421249 FHAD1B1AJZ9 1412 aa11.1□□□□□ -0.63
VIRMA-202ENST00000421249 CARMIL1Q5VZK9 1371 aa11.08□□□□□ -0.63
VIRMA-202ENST00000421249 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
VIRMA-202ENST00000421249 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
VIRMA-202ENST00000421249 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
VIRMA-202ENST00000421249 FAM9AQ8IZU1 332 aaPredicted RBP11.05□□□□□ -0.64
VIRMA-202ENST00000421249 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
VIRMA-202ENST00000421249 NUP160Q12769 1436 aa11.02□□□□□ -0.64
VIRMA-202ENST00000421249 SHROOM2Q13796 1616 aa11.01□□□□□ -0.65
VIRMA-202ENST00000421249 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms