RNA–Protein interactions for RNA: ENST00000420369.5

NR1H3-207, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-207ENST00000420369 NISCHQ9Y2I1 1504 aa44.39■■■■■ 4.7
NR1H3-207ENST00000420369 CCDC180Q9P1Z9 1646 aa39.26■■■■□ 3.88
NR1H3-207ENST00000420369 ABCC9O60706 1549 aa37.33■■■■□ 3.57
NR1H3-207ENST00000420369 ZCCHC6Q5VYS8 1495 aaKnown RBP37.2■■■■□ 3.55
NR1H3-207ENST00000420369 DCAF1Q9Y4B6 1507 aa36.8■■■■□ 3.48
NR1H3-207ENST00000420369 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
NR1H3-207ENST00000420369 NACADO15069 1562 aa36.57■■■■□ 3.44
NR1H3-207ENST00000420369 DCAF8L2P0C7V8 631 aa36.56■■■■□ 3.44
NR1H3-207ENST00000420369 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
NR1H3-207ENST00000420369 SCRIBQ14160 1630 aa35.82■■■■□ 3.32
NR1H3-207ENST00000420369 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
NR1H3-207ENST00000420369 SHROOM4Q9ULL8 1493 aa35.55■■■■□ 3.28
NR1H3-207ENST00000420369 BICRAQ9NZM4 1560 aa35.23■■■■□ 3.23
NR1H3-207ENST00000420369 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.18
NR1H3-207ENST00000420369 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
NR1H3-207ENST00000420369 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
NR1H3-207ENST00000420369 SMARCA4P51532 1647 aa34.34■■■■□ 3.09
NR1H3-207ENST00000420369 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
NR1H3-207ENST00000420369 MROH2BQ7Z745 1585 aa34.21■■■■□ 3.07
NR1H3-207ENST00000420369 RSF1Q96T23 1441 aaPredicted RBP34.09■■■■□ 3.05
NR1H3-207ENST00000420369 WIZO95785 1651 aa33.98■■■■□ 3.03
NR1H3-207ENST00000420369 PEG3Q9GZU2 1588 aa33.96■■■■□ 3.03
NR1H3-207ENST00000420369 SMARCA2P51531 1590 aa33.9■■■■□ 3.02
NR1H3-207ENST00000420369 CC2D2AQ9P2K1 1620 aa33.89■■■■□ 3.02
NR1H3-207ENST00000420369 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
NR1H3-207ENST00000420369 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
NR1H3-207ENST00000420369 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
NR1H3-207ENST00000420369 TOP2AP11388 1531 aaKnown RBP33.67■■■□□ 2.98
NR1H3-207ENST00000420369 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
NR1H3-207ENST00000420369 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
NR1H3-207ENST00000420369 DNAJC5BQ9UF47 199 aa33.23■■■□□ 2.91
NR1H3-207ENST00000420369 CCDC88BA6NC98 1476 aa33.15■■■□□ 2.9
NR1H3-207ENST00000420369 PRDM2Q13029 1718 aa32.88■■■□□ 2.85
NR1H3-207ENST00000420369 LAMC3Q9Y6N6 1575 aa32.73■■■□□ 2.83
NR1H3-207ENST00000420369 CFTRP13569 1480 aa32.71■■■□□ 2.83
NR1H3-207ENST00000420369 CADPSQ9ULU8 1353 aa32.67■■■□□ 2.82
NR1H3-207ENST00000420369 NESP48681 1621 aa32.57■■■□□ 2.8
NR1H3-207ENST00000420369 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
NR1H3-207ENST00000420369 PDS5BQ9NTI5 1447 aa32.37■■■□□ 2.77
NR1H3-207ENST00000420369 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
NR1H3-207ENST00000420369 ABCC8Q09428 1581 aa32.3■■■□□ 2.76
NR1H3-207ENST00000420369 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
NR1H3-207ENST00000420369 WRNQ14191 1432 aaPredicted RBP eCLIP32.17■■■□□ 2.74
NR1H3-207ENST00000420369 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
NR1H3-207ENST00000420369 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
NR1H3-207ENST00000420369 SYNJ1O43426 1573 aa32.12■■■□□ 2.73
NR1H3-207ENST00000420369 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
NR1H3-207ENST00000420369 TOP2BQ02880 1626 aa32.09■■■□□ 2.73
NR1H3-207ENST00000420369 DNMBPQ6XZF7 1577 aa32.08■■■□□ 2.73
NR1H3-207ENST00000420369 CUX1P39880 1505 aa32.07■■■□□ 2.72
NR1H3-207ENST00000420369 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
NR1H3-207ENST00000420369 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
NR1H3-207ENST00000420369 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
NR1H3-207ENST00000420369 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
NR1H3-207ENST00000420369 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
NR1H3-207ENST00000420369 WDR62O43379 1518 aa31.93■■■□□ 2.7
NR1H3-207ENST00000420369 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
NR1H3-207ENST00000420369 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
NR1H3-207ENST00000420369 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
NR1H3-207ENST00000420369 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
NR1H3-207ENST00000420369 SOGA1O94964 1423 aa31.57■■■□□ 2.64
NR1H3-207ENST00000420369 CUX2O14529 1486 aa31.56■■■□□ 2.64
NR1H3-207ENST00000420369 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
NR1H3-207ENST00000420369 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
NR1H3-207ENST00000420369 IFT140Q96RY7 1462 aa31.53■■■□□ 2.64
NR1H3-207ENST00000420369 EEA1Q15075 1411 aa31.47■■■□□ 2.63
NR1H3-207ENST00000420369 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
NR1H3-207ENST00000420369 KIF27Q86VH2 1401 aa31.42■■■□□ 2.62
NR1H3-207ENST00000420369 PBRM1Q86U86 1689 aa31.38■■■□□ 2.61
NR1H3-207ENST00000420369 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
NR1H3-207ENST00000420369 EIF4G3O43432 1585 aaKnown RBP31.35■■■□□ 2.61
NR1H3-207ENST00000420369 ZNF608Q9ULD9 1512 aaPredicted RBP31.28■■■□□ 2.6
NR1H3-207ENST00000420369 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
NR1H3-207ENST00000420369 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
NR1H3-207ENST00000420369 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
NR1H3-207ENST00000420369 ERICH3Q5RHP9 1530 aa31.23■■■□□ 2.59
NR1H3-207ENST00000420369 CUL7Q14999 1698 aa31.22■■■□□ 2.59
NR1H3-207ENST00000420369 AQRO60306 1485 aaKnown RBP eCLIP31.18■■■□□ 2.589e-8■■■■□ 21.2
NR1H3-207ENST00000420369 KIF21BO75037 1637 aa31.16■■■□□ 2.58
NR1H3-207ENST00000420369 GRIN2BQ13224 1484 aa31.15■■■□□ 2.58
NR1H3-207ENST00000420369 CSRNP3Q8WYN3 585 aa31.14■■■□□ 2.58
NR1H3-207ENST00000420369 ADAMTS12P58397 1594 aa31.08■■■□□ 2.57
NR1H3-207ENST00000420369 IGF1RP08069 1367 aa31.07■■■□□ 2.56
NR1H3-207ENST00000420369 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
NR1H3-207ENST00000420369 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.55
NR1H3-207ENST00000420369 MAGI1Q96QZ7 1491 aaPredicted RBP31.01■■■□□ 2.55
NR1H3-207ENST00000420369 GOLGA3Q08378 1498 aa30.98■■■□□ 2.55
NR1H3-207ENST00000420369 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
NR1H3-207ENST00000420369 RAPGEF2Q9Y4G8 1499 aa30.95■■■□□ 2.54
NR1H3-207ENST00000420369 FHAD1B1AJZ9 1412 aa30.93■■■□□ 2.54
NR1H3-207ENST00000420369 CHD1O14646 1710 aa30.86■■■□□ 2.53
NR1H3-207ENST00000420369 CTTNBP2Q8WZ74 1663 aa30.85■■■□□ 2.53
NR1H3-207ENST00000420369 SYNJ2O15056 1496 aa30.85■■■□□ 2.53
NR1H3-207ENST00000420369 GRIN2AQ12879 1464 aa30.77■■■□□ 2.52
NR1H3-207ENST00000420369 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
NR1H3-207ENST00000420369 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
NR1H3-207ENST00000420369 UBTFP17480 764 aaKnown RBP30.68■■■□□ 2.5
NR1H3-207ENST00000420369 TNIKQ9UKE5 1360 aa30.67■■■□□ 2.5
NR1H3-207ENST00000420369 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
NR1H3-207ENST00000420369 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 481.3 ms