RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 NISCHQ9Y2I1 1504 aa34.87■■■■□ 3.17
NOD1-205ENST00000419799 ABCC9O60706 1549 aa31.86■■■□□ 2.69
NOD1-205ENST00000419799 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
NOD1-205ENST00000419799 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
NOD1-205ENST00000419799 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
NOD1-205ENST00000419799 NACADO15069 1562 aa29.89■■■□□ 2.38
NOD1-205ENST00000419799 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
NOD1-205ENST00000419799 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
NOD1-205ENST00000419799 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
NOD1-205ENST00000419799 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
NOD1-205ENST00000419799 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
NOD1-205ENST00000419799 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
NOD1-205ENST00000419799 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
NOD1-205ENST00000419799 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
NOD1-205ENST00000419799 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
NOD1-205ENST00000419799 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
NOD1-205ENST00000419799 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
NOD1-205ENST00000419799 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
NOD1-205ENST00000419799 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
NOD1-205ENST00000419799 CUX2O14529 1486 aa27.7■■■□□ 2.03
NOD1-205ENST00000419799 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
NOD1-205ENST00000419799 ERCC6Q03468 1493 aa27.55■■■□□ 2
NOD1-205ENST00000419799 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
NOD1-205ENST00000419799 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
NOD1-205ENST00000419799 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
NOD1-205ENST00000419799 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
NOD1-205ENST00000419799 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
NOD1-205ENST00000419799 NESP48681 1621 aa27.24■■□□□ 1.95
NOD1-205ENST00000419799 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
NOD1-205ENST00000419799 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
NOD1-205ENST00000419799 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
NOD1-205ENST00000419799 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
NOD1-205ENST00000419799 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
NOD1-205ENST00000419799 PDS5BQ9NTI5 1447 aa26.9■■□□□ 1.9
NOD1-205ENST00000419799 KIF21AQ7Z4S6 1674 aa26.86■■□□□ 1.89
NOD1-205ENST00000419799 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
NOD1-205ENST00000419799 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
NOD1-205ENST00000419799 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
NOD1-205ENST00000419799 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
NOD1-205ENST00000419799 WDR62O43379 1518 aa26.64■■□□□ 1.85
NOD1-205ENST00000419799 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
NOD1-205ENST00000419799 WIZO95785 1651 aa26.47■■□□□ 1.83
NOD1-205ENST00000419799 FANCD2Q9BXW9 1451 aa26.41■■□□□ 1.82
NOD1-205ENST00000419799 OSCARQ8IYS5 282 aa26.35■■□□□ 1.81
NOD1-205ENST00000419799 CFTRP13569 1480 aa26.34■■□□□ 1.81
NOD1-205ENST00000419799 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
NOD1-205ENST00000419799 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
NOD1-205ENST00000419799 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
NOD1-205ENST00000419799 RIMBP3CA6NJZ7 1639 aa26.03■■□□□ 1.76
NOD1-205ENST00000419799 RIMBP3BA6NNM3 1639 aa26.03■■□□□ 1.76
NOD1-205ENST00000419799 RIMBP3Q9UFD9 1639 aa26.03■■□□□ 1.76
NOD1-205ENST00000419799 PRDM2Q13029 1718 aa25.99■■□□□ 1.75
NOD1-205ENST00000419799 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
NOD1-205ENST00000419799 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
NOD1-205ENST00000419799 ARHGEF11O15085 1522 aa25.91■■□□□ 1.74
NOD1-205ENST00000419799 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
NOD1-205ENST00000419799 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
NOD1-205ENST00000419799 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
NOD1-205ENST00000419799 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
NOD1-205ENST00000419799 CYB5RLQ6IPT4 315 aa25.73■■□□□ 1.71
NOD1-205ENST00000419799 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
NOD1-205ENST00000419799 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
NOD1-205ENST00000419799 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.73e-7■■■□□ 17
NOD1-205ENST00000419799 CHD1O14646 1710 aa25.65■■□□□ 1.7
NOD1-205ENST00000419799 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
NOD1-205ENST00000419799 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
NOD1-205ENST00000419799 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
NOD1-205ENST00000419799 FBLN2P98095 1184 aa25.55■■□□□ 1.68
NOD1-205ENST00000419799 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
NOD1-205ENST00000419799 SOGA1O94964 1423 aa25.45■■□□□ 1.66
NOD1-205ENST00000419799 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
NOD1-205ENST00000419799 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
NOD1-205ENST00000419799 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
NOD1-205ENST00000419799 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
NOD1-205ENST00000419799 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
NOD1-205ENST00000419799 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
NOD1-205ENST00000419799 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
NOD1-205ENST00000419799 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
NOD1-205ENST00000419799 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
NOD1-205ENST00000419799 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
NOD1-205ENST00000419799 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
NOD1-205ENST00000419799 CUX1P39880 1505 aa25.24■■□□□ 1.63
NOD1-205ENST00000419799 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
NOD1-205ENST00000419799 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
NOD1-205ENST00000419799 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
NOD1-205ENST00000419799 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
NOD1-205ENST00000419799 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
NOD1-205ENST00000419799 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
NOD1-205ENST00000419799 NUP160Q12769 1436 aa24.91■■□□□ 1.58
NOD1-205ENST00000419799 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
NOD1-205ENST00000419799 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
NOD1-205ENST00000419799 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
NOD1-205ENST00000419799 SUPT5HO00267 1087 aaKnown RBP24.84■■□□□ 1.57
NOD1-205ENST00000419799 SHROOM2Q13796 1616 aa24.83■■□□□ 1.57
NOD1-205ENST00000419799 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
NOD1-205ENST00000419799 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
NOD1-205ENST00000419799 BIVM-ERCC5R4GMW8 1640 aa24.73■■□□□ 1.55
NOD1-205ENST00000419799 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
NOD1-205ENST00000419799 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.54
NOD1-205ENST00000419799 PRG4Q92954 1404 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms