RNA–Protein interactions for RNA: ENST00000419764.1

RHBDF1-203, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-203ENST00000419764 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
RHBDF1-203ENST00000419764 ABCC9O60706 1549 aa23.74■■□□□ 1.39
RHBDF1-203ENST00000419764 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
RHBDF1-203ENST00000419764 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
RHBDF1-203ENST00000419764 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
RHBDF1-203ENST00000419764 NACADO15069 1562 aa22.18■■□□□ 1.14
RHBDF1-203ENST00000419764 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
RHBDF1-203ENST00000419764 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
RHBDF1-203ENST00000419764 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
RHBDF1-203ENST00000419764 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
RHBDF1-203ENST00000419764 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
RHBDF1-203ENST00000419764 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
RHBDF1-203ENST00000419764 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
RHBDF1-203ENST00000419764 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
RHBDF1-203ENST00000419764 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
RHBDF1-203ENST00000419764 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
RHBDF1-203ENST00000419764 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
RHBDF1-203ENST00000419764 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
RHBDF1-203ENST00000419764 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
RHBDF1-203ENST00000419764 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
RHBDF1-203ENST00000419764 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
RHBDF1-203ENST00000419764 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
RHBDF1-203ENST00000419764 NESP48681 1621 aa20.41■□□□□ 0.86
RHBDF1-203ENST00000419764 CUX2O14529 1486 aa20.39■□□□□ 0.85
RHBDF1-203ENST00000419764 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
RHBDF1-203ENST00000419764 HMGXB3Q12766 1538 aa20.33■□□□□ 0.85
RHBDF1-203ENST00000419764 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
RHBDF1-203ENST00000419764 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
RHBDF1-203ENST00000419764 BAZ1BQ9UIG0 1483 aaKnown RBP20.2■□□□□ 0.82
RHBDF1-203ENST00000419764 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
RHBDF1-203ENST00000419764 BAZ1AQ9NRL2 1556 aaPredicted RBP20.2■□□□□ 0.82
RHBDF1-203ENST00000419764 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
RHBDF1-203ENST00000419764 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
RHBDF1-203ENST00000419764 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
RHBDF1-203ENST00000419764 WIZO95785 1651 aa19.97■□□□□ 0.79
RHBDF1-203ENST00000419764 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
RHBDF1-203ENST00000419764 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
RHBDF1-203ENST00000419764 WDR62O43379 1518 aa19.81■□□□□ 0.76
RHBDF1-203ENST00000419764 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
RHBDF1-203ENST00000419764 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
RHBDF1-203ENST00000419764 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
RHBDF1-203ENST00000419764 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
RHBDF1-203ENST00000419764 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
RHBDF1-203ENST00000419764 RSF1Q96T23 1441 aaPredicted RBP19.65■□□□□ 0.74
RHBDF1-203ENST00000419764 CFTRP13569 1480 aa19.62■□□□□ 0.73
RHBDF1-203ENST00000419764 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
RHBDF1-203ENST00000419764 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
RHBDF1-203ENST00000419764 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
RHBDF1-203ENST00000419764 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
RHBDF1-203ENST00000419764 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
RHBDF1-203ENST00000419764 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
RHBDF1-203ENST00000419764 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
RHBDF1-203ENST00000419764 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
RHBDF1-203ENST00000419764 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
RHBDF1-203ENST00000419764 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
RHBDF1-203ENST00000419764 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
RHBDF1-203ENST00000419764 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
RHBDF1-203ENST00000419764 ARHGEF11O15085 1522 aa19.22■□□□□ 0.67
RHBDF1-203ENST00000419764 CHD1O14646 1710 aa19.22■□□□□ 0.67
RHBDF1-203ENST00000419764 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
RHBDF1-203ENST00000419764 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
RHBDF1-203ENST00000419764 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.664e-7■■■■■ 57.7
RHBDF1-203ENST00000419764 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
RHBDF1-203ENST00000419764 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
RHBDF1-203ENST00000419764 ABCC8Q09428 1581 aa19.08■□□□□ 0.65
RHBDF1-203ENST00000419764 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
RHBDF1-203ENST00000419764 CYB5RLQ6IPT4 315 aa19.04■□□□□ 0.64
RHBDF1-203ENST00000419764 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
RHBDF1-203ENST00000419764 FBLN2P98095 1184 aa18.98■□□□□ 0.63
RHBDF1-203ENST00000419764 CUX1P39880 1505 aa18.96■□□□□ 0.63
RHBDF1-203ENST00000419764 FGD5Q6ZNL6 1462 aa18.96■□□□□ 0.63
RHBDF1-203ENST00000419764 SOGA1O94964 1423 aa18.95■□□□□ 0.62
RHBDF1-203ENST00000419764 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
RHBDF1-203ENST00000419764 CLASP1Q7Z460 1538 aa18.93■□□□□ 0.62
RHBDF1-203ENST00000419764 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
RHBDF1-203ENST00000419764 PBRM1Q86U86 1689 aa18.84■□□□□ 0.61
RHBDF1-203ENST00000419764 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
RHBDF1-203ENST00000419764 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
RHBDF1-203ENST00000419764 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
RHBDF1-203ENST00000419764 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
RHBDF1-203ENST00000419764 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
RHBDF1-203ENST00000419764 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
RHBDF1-203ENST00000419764 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
RHBDF1-203ENST00000419764 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
RHBDF1-203ENST00000419764 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
RHBDF1-203ENST00000419764 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
RHBDF1-203ENST00000419764 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
RHBDF1-203ENST00000419764 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
RHBDF1-203ENST00000419764 ADAMTS12P58397 1594 aa18.61■□□□□ 0.57
RHBDF1-203ENST00000419764 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
RHBDF1-203ENST00000419764 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.56
RHBDF1-203ENST00000419764 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
RHBDF1-203ENST00000419764 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
RHBDF1-203ENST00000419764 NUP160Q12769 1436 aa18.54■□□□□ 0.56
RHBDF1-203ENST00000419764 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
RHBDF1-203ENST00000419764 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
RHBDF1-203ENST00000419764 FHAD1B1AJZ9 1412 aa18.44■□□□□ 0.54
RHBDF1-203ENST00000419764 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
RHBDF1-203ENST00000419764 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
RHBDF1-203ENST00000419764 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms