RNA–Protein interactions for RNA: ENST00000419219.1

MRPL39-203, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5

Gene MRPL39, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-203ENST00000419219 NISCHQ9Y2I1 1504 aa37.41■■■■□ 3.58
MRPL39-203ENST00000419219 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
MRPL39-203ENST00000419219 ABCC9O60706 1549 aa31.75■■■□□ 2.67
MRPL39-203ENST00000419219 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
MRPL39-203ENST00000419219 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
MRPL39-203ENST00000419219 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
MRPL39-203ENST00000419219 NACADO15069 1562 aa30.89■■■□□ 2.54
MRPL39-203ENST00000419219 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
MRPL39-203ENST00000419219 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
MRPL39-203ENST00000419219 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
MRPL39-203ENST00000419219 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
MRPL39-203ENST00000419219 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
MRPL39-203ENST00000419219 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
MRPL39-203ENST00000419219 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
MRPL39-203ENST00000419219 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
MRPL39-203ENST00000419219 EIF4G1Q04637 1599 aaKnown RBP29.08■■■□□ 2.25
MRPL39-203ENST00000419219 SMARCA4P51532 1647 aa28.99■■■□□ 2.23
MRPL39-203ENST00000419219 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
MRPL39-203ENST00000419219 MROH2BQ7Z745 1585 aa28.88■■■□□ 2.21
MRPL39-203ENST00000419219 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
MRPL39-203ENST00000419219 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.18
MRPL39-203ENST00000419219 WIZO95785 1651 aa28.66■■■□□ 2.18
MRPL39-203ENST00000419219 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
MRPL39-203ENST00000419219 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
MRPL39-203ENST00000419219 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
MRPL39-203ENST00000419219 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
MRPL39-203ENST00000419219 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
MRPL39-203ENST00000419219 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
MRPL39-203ENST00000419219 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
MRPL39-203ENST00000419219 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
MRPL39-203ENST00000419219 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
MRPL39-203ENST00000419219 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
MRPL39-203ENST00000419219 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
MRPL39-203ENST00000419219 NESP48681 1621 aa27.7■■■□□ 2.03
MRPL39-203ENST00000419219 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
MRPL39-203ENST00000419219 CFTRP13569 1480 aa27.64■■■□□ 2.01
MRPL39-203ENST00000419219 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
MRPL39-203ENST00000419219 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
MRPL39-203ENST00000419219 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
MRPL39-203ENST00000419219 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
MRPL39-203ENST00000419219 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
MRPL39-203ENST00000419219 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
MRPL39-203ENST00000419219 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
MRPL39-203ENST00000419219 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
MRPL39-203ENST00000419219 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
MRPL39-203ENST00000419219 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
MRPL39-203ENST00000419219 WDR62O43379 1518 aa27.11■■□□□ 1.93
MRPL39-203ENST00000419219 CUX1P39880 1505 aa27.07■■□□□ 1.92
MRPL39-203ENST00000419219 DNMBPQ6XZF7 1577 aa27.07■■□□□ 1.92
MRPL39-203ENST00000419219 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
MRPL39-203ENST00000419219 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
MRPL39-203ENST00000419219 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
MRPL39-203ENST00000419219 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
MRPL39-203ENST00000419219 WRNQ14191 1432 aaPredicted RBP eCLIP26.95■■□□□ 1.9
MRPL39-203ENST00000419219 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
MRPL39-203ENST00000419219 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
MRPL39-203ENST00000419219 CUX2O14529 1486 aa26.82■■□□□ 1.88
MRPL39-203ENST00000419219 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
MRPL39-203ENST00000419219 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
MRPL39-203ENST00000419219 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
MRPL39-203ENST00000419219 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
MRPL39-203ENST00000419219 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
MRPL39-203ENST00000419219 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
MRPL39-203ENST00000419219 SOGA1O94964 1423 aa26.59■■□□□ 1.85
MRPL39-203ENST00000419219 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
MRPL39-203ENST00000419219 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
MRPL39-203ENST00000419219 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
MRPL39-203ENST00000419219 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
MRPL39-203ENST00000419219 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
MRPL39-203ENST00000419219 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■■■■ 28.9
MRPL39-203ENST00000419219 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
MRPL39-203ENST00000419219 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.82
MRPL39-203ENST00000419219 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
MRPL39-203ENST00000419219 KIF27Q86VH2 1401 aa26.3■■□□□ 1.8
MRPL39-203ENST00000419219 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
MRPL39-203ENST00000419219 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
MRPL39-203ENST00000419219 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
MRPL39-203ENST00000419219 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
MRPL39-203ENST00000419219 CUL7Q14999 1698 aa26.21■■□□□ 1.79
MRPL39-203ENST00000419219 CHD1O14646 1710 aa26.2■■□□□ 1.79
MRPL39-203ENST00000419219 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
MRPL39-203ENST00000419219 IGF1RP08069 1367 aa26.16■■□□□ 1.78
MRPL39-203ENST00000419219 EEA1Q15075 1411 aa26.14■■□□□ 1.78
MRPL39-203ENST00000419219 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
MRPL39-203ENST00000419219 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
MRPL39-203ENST00000419219 PRXQ9BXM0 1461 aa26.04■■□□□ 1.76
MRPL39-203ENST00000419219 KIF21BO75037 1637 aa26.03■■□□□ 1.76
MRPL39-203ENST00000419219 FAM9AQ8IZU1 332 aaPredicted RBP25.99■■□□□ 1.75
MRPL39-203ENST00000419219 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
MRPL39-203ENST00000419219 CARMIL1Q5VZK9 1371 aa25.97■■□□□ 1.75
MRPL39-203ENST00000419219 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
MRPL39-203ENST00000419219 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
MRPL39-203ENST00000419219 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
MRPL39-203ENST00000419219 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
MRPL39-203ENST00000419219 NUP160Q12769 1436 aa25.87■■□□□ 1.73
MRPL39-203ENST00000419219 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
MRPL39-203ENST00000419219 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
MRPL39-203ENST00000419219 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
MRPL39-203ENST00000419219 FBLN2P98095 1184 aa25.77■■□□□ 1.72
MRPL39-203ENST00000419219 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms