RNA–Protein interactions for RNA: ENST00000418942.1

AP000233.2-202, humanhuman

TSL 5 BASIC

Gene AP000233.2, Length 684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000233.2-202ENST00000418942 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
AP000233.2-202ENST00000418942 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
AP000233.2-202ENST00000418942 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
AP000233.2-202ENST00000418942 ABCC9O60706 1549 aa20.52■□□□□ 0.87
AP000233.2-202ENST00000418942 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
AP000233.2-202ENST00000418942 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
AP000233.2-202ENST00000418942 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
AP000233.2-202ENST00000418942 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
AP000233.2-202ENST00000418942 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
AP000233.2-202ENST00000418942 NACADO15069 1562 aa19.23■□□□□ 0.67
AP000233.2-202ENST00000418942 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
AP000233.2-202ENST00000418942 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
AP000233.2-202ENST00000418942 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
AP000233.2-202ENST00000418942 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
AP000233.2-202ENST00000418942 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
AP000233.2-202ENST00000418942 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
AP000233.2-202ENST00000418942 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
AP000233.2-202ENST00000418942 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
AP000233.2-202ENST00000418942 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
AP000233.2-202ENST00000418942 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
AP000233.2-202ENST00000418942 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
AP000233.2-202ENST00000418942 FOXD1Q16676 465 aa18.45■□□□□ 0.54
AP000233.2-202ENST00000418942 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
AP000233.2-202ENST00000418942 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
AP000233.2-202ENST00000418942 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
AP000233.2-202ENST00000418942 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
AP000233.2-202ENST00000418942 CUX2O14529 1486 aa17.72■□□□□ 0.43
AP000233.2-202ENST00000418942 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
AP000233.2-202ENST00000418942 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
AP000233.2-202ENST00000418942 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
AP000233.2-202ENST00000418942 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
AP000233.2-202ENST00000418942 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
AP000233.2-202ENST00000418942 NESP48681 1621 aa17.58■□□□□ 0.4
AP000233.2-202ENST00000418942 BAZ1BQ9UIG0 1483 aaKnown RBP17.52■□□□□ 0.4
AP000233.2-202ENST00000418942 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
AP000233.2-202ENST00000418942 MSH5O43196 834 aa17.48■□□□□ 0.39
AP000233.2-202ENST00000418942 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
AP000233.2-202ENST00000418942 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
AP000233.2-202ENST00000418942 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
AP000233.2-202ENST00000418942 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
AP000233.2-202ENST00000418942 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
AP000233.2-202ENST00000418942 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
AP000233.2-202ENST00000418942 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
AP000233.2-202ENST00000418942 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
AP000233.2-202ENST00000418942 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
AP000233.2-202ENST00000418942 WIZO95785 1651 aa17.19■□□□□ 0.34
AP000233.2-202ENST00000418942 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
AP000233.2-202ENST00000418942 WDR62O43379 1518 aa17.12■□□□□ 0.33
AP000233.2-202ENST00000418942 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
AP000233.2-202ENST00000418942 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
AP000233.2-202ENST00000418942 FANCD2Q9BXW9 1451 aa17.05■□□□□ 0.32
AP000233.2-202ENST00000418942 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
AP000233.2-202ENST00000418942 CFTRP13569 1480 aa16.99■□□□□ 0.31
AP000233.2-202ENST00000418942 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
AP000233.2-202ENST00000418942 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
AP000233.2-202ENST00000418942 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
AP000233.2-202ENST00000418942 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
AP000233.2-202ENST00000418942 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
AP000233.2-202ENST00000418942 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
AP000233.2-202ENST00000418942 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
AP000233.2-202ENST00000418942 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
AP000233.2-202ENST00000418942 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
AP000233.2-202ENST00000418942 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
AP000233.2-202ENST00000418942 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
AP000233.2-202ENST00000418942 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
AP000233.2-202ENST00000418942 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
AP000233.2-202ENST00000418942 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
AP000233.2-202ENST00000418942 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
AP000233.2-202ENST00000418942 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
AP000233.2-202ENST00000418942 ADRA2BP18089 450 aa16.58■□□□□ 0.24
AP000233.2-202ENST00000418942 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
AP000233.2-202ENST00000418942 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
AP000233.2-202ENST00000418942 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
AP000233.2-202ENST00000418942 CHD1O14646 1710 aa16.55■□□□□ 0.24
AP000233.2-202ENST00000418942 FBLN2P98095 1184 aa16.53■□□□□ 0.24
AP000233.2-202ENST00000418942 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
AP000233.2-202ENST00000418942 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
AP000233.2-202ENST00000418942 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
AP000233.2-202ENST00000418942 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
AP000233.2-202ENST00000418942 SOGA1O94964 1423 aa16.45■□□□□ 0.22
AP000233.2-202ENST00000418942 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
AP000233.2-202ENST00000418942 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
AP000233.2-202ENST00000418942 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
AP000233.2-202ENST00000418942 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
AP000233.2-202ENST00000418942 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
AP000233.2-202ENST00000418942 CUX1P39880 1505 aa16.35■□□□□ 0.21
AP000233.2-202ENST00000418942 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
AP000233.2-202ENST00000418942 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
AP000233.2-202ENST00000418942 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
AP000233.2-202ENST00000418942 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
AP000233.2-202ENST00000418942 GRIN2BQ13224 1484 aa16.31■□□□□ 0.2
AP000233.2-202ENST00000418942 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
AP000233.2-202ENST00000418942 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
AP000233.2-202ENST00000418942 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
AP000233.2-202ENST00000418942 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
AP000233.2-202ENST00000418942 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
AP000233.2-202ENST00000418942 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
AP000233.2-202ENST00000418942 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
AP000233.2-202ENST00000418942 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
AP000233.2-202ENST00000418942 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms