RNA–Protein interactions for RNA: ENST00000418333.6

TGFA-203, Transcript of transforming growth factor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFA, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-203ENST00000418333 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
TGFA-203ENST00000418333 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
TGFA-203ENST00000418333 ABCC9O60706 1549 aa24.24■■□□□ 1.47
TGFA-203ENST00000418333 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
TGFA-203ENST00000418333 NACADO15069 1562 aa23.1■■□□□ 1.29
TGFA-203ENST00000418333 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
TGFA-203ENST00000418333 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
TGFA-203ENST00000418333 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
TGFA-203ENST00000418333 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
TGFA-203ENST00000418333 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
TGFA-203ENST00000418333 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
TGFA-203ENST00000418333 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
TGFA-203ENST00000418333 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
TGFA-203ENST00000418333 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
TGFA-203ENST00000418333 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
TGFA-203ENST00000418333 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
TGFA-203ENST00000418333 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
TGFA-203ENST00000418333 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
TGFA-203ENST00000418333 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
TGFA-203ENST00000418333 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TGFA-203ENST00000418333 SMARCA2P51531 1590 aa21.27■□□□□ 0.99
TGFA-203ENST00000418333 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
TGFA-203ENST00000418333 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
TGFA-203ENST00000418333 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
TGFA-203ENST00000418333 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
TGFA-203ENST00000418333 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
TGFA-203ENST00000418333 WIZO95785 1651 aa21.11■□□□□ 0.97
TGFA-203ENST00000418333 PEG3Q9GZU2 1588 aa21.1■□□□□ 0.97
TGFA-203ENST00000418333 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
TGFA-203ENST00000418333 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
TGFA-203ENST00000418333 NESP48681 1621 aa20.87■□□□□ 0.93
TGFA-203ENST00000418333 LAMC3Q9Y6N6 1575 aa20.83■□□□□ 0.92
TGFA-203ENST00000418333 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
TGFA-203ENST00000418333 CUX2O14529 1486 aa20.81■□□□□ 0.92
TGFA-203ENST00000418333 KIF21AQ7Z4S6 1674 aa20.71■□□□□ 0.91
TGFA-203ENST00000418333 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
TGFA-203ENST00000418333 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
TGFA-203ENST00000418333 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
TGFA-203ENST00000418333 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
TGFA-203ENST00000418333 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
TGFA-203ENST00000418333 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
TGFA-203ENST00000418333 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
TGFA-203ENST00000418333 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
TGFA-203ENST00000418333 CFTRP13569 1480 aa20.44■□□□□ 0.86
TGFA-203ENST00000418333 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
TGFA-203ENST00000418333 WDR62O43379 1518 aa20.43■□□□□ 0.86
TGFA-203ENST00000418333 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
TGFA-203ENST00000418333 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
TGFA-203ENST00000418333 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
TGFA-203ENST00000418333 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
TGFA-203ENST00000418333 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
TGFA-203ENST00000418333 IFT140Q96RY7 1462 aa20.02■□□□□ 0.8
TGFA-203ENST00000418333 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
TGFA-203ENST00000418333 CUX1P39880 1505 aa19.93■□□□□ 0.78
TGFA-203ENST00000418333 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
TGFA-203ENST00000418333 TARBP1Q13395 1621 aaKnown RBP19.89■□□□□ 0.77
TGFA-203ENST00000418333 POLA1P09884 1462 aaPredicted RBP19.88■□□□□ 0.77
TGFA-203ENST00000418333 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
TGFA-203ENST00000418333 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
TGFA-203ENST00000418333 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.76
TGFA-203ENST00000418333 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
TGFA-203ENST00000418333 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
TGFA-203ENST00000418333 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
TGFA-203ENST00000418333 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
TGFA-203ENST00000418333 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.76
TGFA-203ENST00000418333 SOGA1O94964 1423 aa19.76■□□□□ 0.75
TGFA-203ENST00000418333 CHD1O14646 1710 aa19.76■□□□□ 0.75
TGFA-203ENST00000418333 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
TGFA-203ENST00000418333 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
TGFA-203ENST00000418333 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
TGFA-203ENST00000418333 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
TGFA-203ENST00000418333 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
TGFA-203ENST00000418333 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.73
TGFA-203ENST00000418333 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.73
TGFA-203ENST00000418333 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.73
TGFA-203ENST00000418333 FBLN2P98095 1184 aa19.62■□□□□ 0.73
TGFA-203ENST00000418333 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
TGFA-203ENST00000418333 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
TGFA-203ENST00000418333 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
TGFA-203ENST00000418333 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.73
TGFA-203ENST00000418333 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.72
TGFA-203ENST00000418333 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
TGFA-203ENST00000418333 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
TGFA-203ENST00000418333 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
TGFA-203ENST00000418333 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
TGFA-203ENST00000418333 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
TGFA-203ENST00000418333 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
TGFA-203ENST00000418333 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
TGFA-203ENST00000418333 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
TGFA-203ENST00000418333 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
TGFA-203ENST00000418333 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
TGFA-203ENST00000418333 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
TGFA-203ENST00000418333 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
TGFA-203ENST00000418333 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
TGFA-203ENST00000418333 CEP170Q5SW79 1584 aa19.29■□□□□ 0.68
TGFA-203ENST00000418333 CUL7Q14999 1698 aa19.28■□□□□ 0.68
TGFA-203ENST00000418333 NUP160Q12769 1436 aa19.25■□□□□ 0.67
TGFA-203ENST00000418333 IGF1RP08069 1367 aa19.22■□□□□ 0.67
TGFA-203ENST00000418333 SHROOM2Q13796 1616 aa19.19■□□□□ 0.66
TGFA-203ENST00000418333 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms