RNA–Protein interactions for RNA: ENST00000417930.1

LINC01871-201, Transcript of long intergenic non-protein coding RNA 1871, humanhuman

TSL 2 BASIC

Gene LINC01871, Length 243 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01871-201ENST00000417930 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.9
LINC01871-201ENST00000417930 ABCC9O60706 1549 aa24.31■■□□□ 1.48
LINC01871-201ENST00000417930 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
LINC01871-201ENST00000417930 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
LINC01871-201ENST00000417930 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
LINC01871-201ENST00000417930 NACADO15069 1562 aa22.92■■□□□ 1.26
LINC01871-201ENST00000417930 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
LINC01871-201ENST00000417930 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
LINC01871-201ENST00000417930 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
LINC01871-201ENST00000417930 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
LINC01871-201ENST00000417930 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
LINC01871-201ENST00000417930 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
LINC01871-201ENST00000417930 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
LINC01871-201ENST00000417930 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
LINC01871-201ENST00000417930 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
LINC01871-201ENST00000417930 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
LINC01871-201ENST00000417930 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
LINC01871-201ENST00000417930 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
LINC01871-201ENST00000417930 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
LINC01871-201ENST00000417930 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
LINC01871-201ENST00000417930 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.97
LINC01871-201ENST00000417930 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
LINC01871-201ENST00000417930 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
LINC01871-201ENST00000417930 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
LINC01871-201ENST00000417930 CUX2O14529 1486 aa20.97■□□□□ 0.95
LINC01871-201ENST00000417930 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
LINC01871-201ENST00000417930 BAZ1AQ9NRL2 1556 aaPredicted RBP20.93■□□□□ 0.94
LINC01871-201ENST00000417930 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
LINC01871-201ENST00000417930 NESP48681 1621 aa20.84■□□□□ 0.93
LINC01871-201ENST00000417930 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
LINC01871-201ENST00000417930 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
LINC01871-201ENST00000417930 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
LINC01871-201ENST00000417930 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
LINC01871-201ENST00000417930 THOC2Q8NI27 1593 aaKnown RBP20.6■□□□□ 0.89
LINC01871-201ENST00000417930 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
LINC01871-201ENST00000417930 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
LINC01871-201ENST00000417930 WIZO95785 1651 aa20.51■□□□□ 0.87
LINC01871-201ENST00000417930 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
LINC01871-201ENST00000417930 WDR62O43379 1518 aa20.33■□□□□ 0.85
LINC01871-201ENST00000417930 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
LINC01871-201ENST00000417930 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
LINC01871-201ENST00000417930 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
LINC01871-201ENST00000417930 CFTRP13569 1480 aa20.25■□□□□ 0.83
LINC01871-201ENST00000417930 TOP2AP11388 1531 aaKnown RBP20.23■□□□□ 0.83
LINC01871-201ENST00000417930 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
LINC01871-201ENST00000417930 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
LINC01871-201ENST00000417930 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
LINC01871-201ENST00000417930 CCDC88BA6NC98 1476 aa20.04■□□□□ 0.8
LINC01871-201ENST00000417930 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
LINC01871-201ENST00000417930 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
LINC01871-201ENST00000417930 TOPBP1Q92547 1522 aa19.89■□□□□ 0.77
LINC01871-201ENST00000417930 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
LINC01871-201ENST00000417930 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
LINC01871-201ENST00000417930 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
LINC01871-201ENST00000417930 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
LINC01871-201ENST00000417930 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
LINC01871-201ENST00000417930 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
LINC01871-201ENST00000417930 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
LINC01871-201ENST00000417930 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
LINC01871-201ENST00000417930 FBLN2P98095 1184 aa19.7■□□□□ 0.74
LINC01871-201ENST00000417930 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
LINC01871-201ENST00000417930 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
LINC01871-201ENST00000417930 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
LINC01871-201ENST00000417930 SOGA1O94964 1423 aa19.64■□□□□ 0.73
LINC01871-201ENST00000417930 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
LINC01871-201ENST00000417930 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
LINC01871-201ENST00000417930 CHD1O14646 1710 aa19.62■□□□□ 0.73
LINC01871-201ENST00000417930 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
LINC01871-201ENST00000417930 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
LINC01871-201ENST00000417930 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
LINC01871-201ENST00000417930 CUX1P39880 1505 aa19.51■□□□□ 0.71
LINC01871-201ENST00000417930 SNAPC4Q5SXM2 1469 aa19.49■□□□□ 0.71
LINC01871-201ENST00000417930 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
LINC01871-201ENST00000417930 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
LINC01871-201ENST00000417930 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
LINC01871-201ENST00000417930 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
LINC01871-201ENST00000417930 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
LINC01871-201ENST00000417930 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
LINC01871-201ENST00000417930 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
LINC01871-201ENST00000417930 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
LINC01871-201ENST00000417930 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
LINC01871-201ENST00000417930 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
LINC01871-201ENST00000417930 PBRM1Q86U86 1689 aa19.33■□□□□ 0.68
LINC01871-201ENST00000417930 ABCA10Q8WWZ4 1543 aa19.31■□□□□ 0.68
LINC01871-201ENST00000417930 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.68
LINC01871-201ENST00000417930 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
LINC01871-201ENST00000417930 GRIN2AQ12879 1464 aa19.18■□□□□ 0.66
LINC01871-201ENST00000417930 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
LINC01871-201ENST00000417930 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
LINC01871-201ENST00000417930 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
LINC01871-201ENST00000417930 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
LINC01871-201ENST00000417930 NUP160Q12769 1436 aa19.1■□□□□ 0.65
LINC01871-201ENST00000417930 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
LINC01871-201ENST00000417930 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
LINC01871-201ENST00000417930 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
LINC01871-201ENST00000417930 SHROOM2Q13796 1616 aa19■□□□□ 0.63
LINC01871-201ENST00000417930 JPH4Q96JJ6 628 aa19■□□□□ 0.63
LINC01871-201ENST00000417930 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
LINC01871-201ENST00000417930 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
LINC01871-201ENST00000417930 NPM1P06748 294 aaKnown RBP eCLIP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms