RNA–Protein interactions for RNA: ENST00000417744.5

LRRC3B-203, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-203ENST00000417744 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
LRRC3B-203ENST00000417744 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
LRRC3B-203ENST00000417744 ABCC9O60706 1549 aa24.55■■□□□ 1.52
LRRC3B-203ENST00000417744 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
LRRC3B-203ENST00000417744 NACADO15069 1562 aa23.4■■□□□ 1.34
LRRC3B-203ENST00000417744 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
LRRC3B-203ENST00000417744 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
LRRC3B-203ENST00000417744 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
LRRC3B-203ENST00000417744 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
LRRC3B-203ENST00000417744 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
LRRC3B-203ENST00000417744 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
LRRC3B-203ENST00000417744 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
LRRC3B-203ENST00000417744 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
LRRC3B-203ENST00000417744 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
LRRC3B-203ENST00000417744 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
LRRC3B-203ENST00000417744 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
LRRC3B-203ENST00000417744 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
LRRC3B-203ENST00000417744 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
LRRC3B-203ENST00000417744 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
LRRC3B-203ENST00000417744 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
LRRC3B-203ENST00000417744 SMARCA4P51532 1647 aa21.64■■□□□ 1.06
LRRC3B-203ENST00000417744 NCAPD3P42695 1498 aa21.62■■□□□ 1.05
LRRC3B-203ENST00000417744 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
LRRC3B-203ENST00000417744 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
LRRC3B-203ENST00000417744 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
LRRC3B-203ENST00000417744 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
LRRC3B-203ENST00000417744 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
LRRC3B-203ENST00000417744 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
LRRC3B-203ENST00000417744 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
LRRC3B-203ENST00000417744 WIZO95785 1651 aa21.22■□□□□ 0.99
LRRC3B-203ENST00000417744 NESP48681 1621 aa21.2■□□□□ 0.98
LRRC3B-203ENST00000417744 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
LRRC3B-203ENST00000417744 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
LRRC3B-203ENST00000417744 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
LRRC3B-203ENST00000417744 CUX2O14529 1486 aa21■□□□□ 0.95
LRRC3B-203ENST00000417744 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
LRRC3B-203ENST00000417744 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
LRRC3B-203ENST00000417744 PDS5BQ9NTI5 1447 aa20.92■□□□□ 0.94
LRRC3B-203ENST00000417744 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
LRRC3B-203ENST00000417744 THOC2Q8NI27 1593 aaKnown RBP20.9■□□□□ 0.94
LRRC3B-203ENST00000417744 CFTRP13569 1480 aa20.81■□□□□ 0.92
LRRC3B-203ENST00000417744 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
LRRC3B-203ENST00000417744 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
LRRC3B-203ENST00000417744 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
LRRC3B-203ENST00000417744 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
LRRC3B-203ENST00000417744 WDR62O43379 1518 aa20.68■□□□□ 0.9
LRRC3B-203ENST00000417744 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
LRRC3B-203ENST00000417744 PRDM2Q13029 1718 aa20.58■□□□□ 0.88
LRRC3B-203ENST00000417744 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
LRRC3B-203ENST00000417744 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
LRRC3B-203ENST00000417744 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
LRRC3B-203ENST00000417744 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
LRRC3B-203ENST00000417744 DNMBPQ6XZF7 1577 aa20.32■□□□□ 0.84
LRRC3B-203ENST00000417744 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
LRRC3B-203ENST00000417744 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
LRRC3B-203ENST00000417744 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
LRRC3B-203ENST00000417744 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
LRRC3B-203ENST00000417744 CUX1P39880 1505 aa20.16■□□□□ 0.82
LRRC3B-203ENST00000417744 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
LRRC3B-203ENST00000417744 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
LRRC3B-203ENST00000417744 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
LRRC3B-203ENST00000417744 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
LRRC3B-203ENST00000417744 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
LRRC3B-203ENST00000417744 SOGA1O94964 1423 aa20.1■□□□□ 0.81
LRRC3B-203ENST00000417744 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
LRRC3B-203ENST00000417744 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
LRRC3B-203ENST00000417744 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
LRRC3B-203ENST00000417744 CHD1O14646 1710 aa19.92■□□□□ 0.78
LRRC3B-203ENST00000417744 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
LRRC3B-203ENST00000417744 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
LRRC3B-203ENST00000417744 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
LRRC3B-203ENST00000417744 ABCA10Q8WWZ4 1543 aa19.9■□□□□ 0.78
LRRC3B-203ENST00000417744 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
LRRC3B-203ENST00000417744 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.78
LRRC3B-203ENST00000417744 FBLN2P98095 1184 aa19.89■□□□□ 0.77
LRRC3B-203ENST00000417744 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
LRRC3B-203ENST00000417744 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
LRRC3B-203ENST00000417744 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
LRRC3B-203ENST00000417744 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
LRRC3B-203ENST00000417744 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
LRRC3B-203ENST00000417744 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
LRRC3B-203ENST00000417744 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
LRRC3B-203ENST00000417744 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
LRRC3B-203ENST00000417744 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
LRRC3B-203ENST00000417744 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
LRRC3B-203ENST00000417744 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
LRRC3B-203ENST00000417744 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
LRRC3B-203ENST00000417744 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
LRRC3B-203ENST00000417744 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
LRRC3B-203ENST00000417744 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
LRRC3B-203ENST00000417744 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
LRRC3B-203ENST00000417744 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
LRRC3B-203ENST00000417744 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
LRRC3B-203ENST00000417744 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
LRRC3B-203ENST00000417744 NUP160Q12769 1436 aa19.57■□□□□ 0.72
LRRC3B-203ENST00000417744 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
LRRC3B-203ENST00000417744 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
LRRC3B-203ENST00000417744 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
LRRC3B-203ENST00000417744 IGF1RP08069 1367 aa19.5■□□□□ 0.71
LRRC3B-203ENST00000417744 ERCC6L2Q5T890 1561 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms