RNA–Protein interactions for RNA: ENST00000417736.2

TUBB6-202, Transcript of tubulin beta 6 class V, humanhuman

TSL 2

Gene TUBB6, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-202ENST00000417736 NISCHQ9Y2I1 1504 aa55.08■■■■■ 6.41
TUBB6-202ENST00000417736 CCDC180Q9P1Z9 1646 aa47.87■■■■■ 5.25
TUBB6-202ENST00000417736 ZCCHC6Q5VYS8 1495 aaKnown RBP46.3■■■■■ 5
TUBB6-202ENST00000417736 DCAF8L2P0C7V8 631 aa45.57■■■■■ 4.88
TUBB6-202ENST00000417736 DCAF1Q9Y4B6 1507 aa45.47■■■■■ 4.87
TUBB6-202ENST00000417736 SHROOM4Q9ULL8 1493 aa45.21■■■■■ 4.83
TUBB6-202ENST00000417736 ABCC9O60706 1549 aa45.21■■■■■ 4.83
TUBB6-202ENST00000417736 MYO15BQ96JP2 1530 aa44.84■■■■■ 4.77
TUBB6-202ENST00000417736 NACADO15069 1562 aa44.56■■■■■ 4.72
TUBB6-202ENST00000417736 SCRIBQ14160 1630 aa44.16■■■■■ 4.66
TUBB6-202ENST00000417736 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
TUBB6-202ENST00000417736 SUPT5HO00267 1087 aaKnown RBP43.61■■■■■ 4.57
TUBB6-202ENST00000417736 UNC13AQ9UPW8 1703 aa43.31■■■■■ 4.52
TUBB6-202ENST00000417736 CECR2Q9BXF3 1484 aa42.84■■■■■ 4.45
TUBB6-202ENST00000417736 BICRAQ9NZM4 1560 aa42.84■■■■■ 4.45
TUBB6-202ENST00000417736 RSF1Q96T23 1441 aaPredicted RBP42.84■■■■■ 4.45
TUBB6-202ENST00000417736 PABPN1Q86U42 306 aaKnown RBP eCLIP42.72■■■■■ 4.43
TUBB6-202ENST00000417736 MROH2BQ7Z745 1585 aa42.6■■■■■ 4.41
TUBB6-202ENST00000417736 BAZ1AQ9NRL2 1556 aaPredicted RBP42.5■■■■■ 4.39
TUBB6-202ENST00000417736 SMARCA4P51532 1647 aa42.3■■■■■ 4.36
TUBB6-202ENST00000417736 WIZO95785 1651 aa42.28■■■■■ 4.36
TUBB6-202ENST00000417736 CHIC1Q5VXU3 224 aa41.81■■■■■ 4.28
TUBB6-202ENST00000417736 TOP2AP11388 1531 aaKnown RBP41.79■■■■■ 4.28
TUBB6-202ENST00000417736 PEG3Q9GZU2 1588 aa41.72■■■■■ 4.27
TUBB6-202ENST00000417736 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
TUBB6-202ENST00000417736 EIF4G1Q04637 1599 aaKnown RBP41.53■■■■■ 4.24
TUBB6-202ENST00000417736 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
TUBB6-202ENST00000417736 CCDC88BA6NC98 1476 aa41.41■■■■■ 4.22
TUBB6-202ENST00000417736 BAZ1BQ9UIG0 1483 aaKnown RBP41.34■■■■■ 4.21
TUBB6-202ENST00000417736 NCAPD3P42695 1498 aa41.14■■■■■ 4.18
TUBB6-202ENST00000417736 HMGXB3Q12766 1538 aa41.08■■■■■ 4.17
TUBB6-202ENST00000417736 TRIM41Q8WV44 630 aa40.93■■■■■ 4.14
TUBB6-202ENST00000417736 CC2D2AQ9P2K1 1620 aa40.88■■■■■ 4.13
TUBB6-202ENST00000417736 ABCC8Q09428 1581 aa40.64■■■■■ 4.1
TUBB6-202ENST00000417736 DNAJC5BQ9UF47 199 aa40.53■■■■■ 4.08
TUBB6-202ENST00000417736 WRNQ14191 1432 aaPredicted RBP eCLIP40.31■■■■■ 4.04
TUBB6-202ENST00000417736 CFTRP13569 1480 aa40.29■■■■■ 4.04
TUBB6-202ENST00000417736 LOC105371045A0A1W2PR82 267 aa40.28■■■■■ 4.04
TUBB6-202ENST00000417736 FAM9AQ8IZU1 332 aaPredicted RBP40.27■■■■■ 4.04
TUBB6-202ENST00000417736 SYNJ1O43426 1573 aa40.15■■■■■ 4.02
TUBB6-202ENST00000417736 CADPSQ9ULU8 1353 aa40.13■■■■■ 4.01
TUBB6-202ENST00000417736 PRDM2Q13029 1718 aa40.07■■■■■ 4.01
TUBB6-202ENST00000417736 TOP2BQ02880 1626 aa39.93■■■■□ 3.98
TUBB6-202ENST00000417736 SOGA1O94964 1423 aa39.92■■■■□ 3.98
TUBB6-202ENST00000417736 BIVM-ERCC5R4GMW8 1640 aa39.88■■■■□ 3.97
TUBB6-202ENST00000417736 CUX1P39880 1505 aa39.81■■■■□ 3.96
TUBB6-202ENST00000417736 EEA1Q15075 1411 aa39.79■■■■□ 3.96
TUBB6-202ENST00000417736 RUSC2Q8N2Y8 1516 aa39.78■■■■□ 3.96
TUBB6-202ENST00000417736 NESP48681 1621 aa39.77■■■■□ 3.96
TUBB6-202ENST00000417736 EHMT2Q96KQ7 1210 aa39.74■■■■□ 3.95
TUBB6-202ENST00000417736 FANCD2Q9BXW9 1451 aa39.7■■■■□ 3.95
TUBB6-202ENST00000417736 LAMC3Q9Y6N6 1575 aa39.7■■■■□ 3.95
TUBB6-202ENST00000417736 CSRNP3Q8WYN3 585 aa39.63■■■■□ 3.94
TUBB6-202ENST00000417736 CEP164Q9UPV0 1460 aa39.41■■■■□ 3.9
TUBB6-202ENST00000417736 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
TUBB6-202ENST00000417736 DNMBPQ6XZF7 1577 aa39.35■■■■□ 3.89
TUBB6-202ENST00000417736 FGD5Q6ZNL6 1462 aa39.35■■■■□ 3.89
TUBB6-202ENST00000417736 GOLGA3Q08378 1498 aa39.3■■■■□ 3.88
TUBB6-202ENST00000417736 TOPBP1Q92547 1522 aa39.29■■■■□ 3.88
TUBB6-202ENST00000417736 KIF21BO75037 1637 aa39.28■■■■□ 3.88
TUBB6-202ENST00000417736 KIF27Q86VH2 1401 aa39.26■■■■□ 3.88
TUBB6-202ENST00000417736 KIF21AQ7Z4S6 1674 aa39.25■■■■□ 3.87
TUBB6-202ENST00000417736 TNIKQ9UKE5 1360 aa39.21■■■■□ 3.87
TUBB6-202ENST00000417736 URB2Q14146 1524 aaKnown RBP39.2■■■■□ 3.87
TUBB6-202ENST00000417736 UBTFP17480 764 aaKnown RBP39.18■■■■□ 3.86
TUBB6-202ENST00000417736 CUX2O14529 1486 aa39.14■■■■□ 3.86
TUBB6-202ENST00000417736 POLA1P09884 1462 aaPredicted RBP39.12■■■■□ 3.85
TUBB6-202ENST00000417736 RAPGEF2Q9Y4G8 1499 aa39.08■■■■□ 3.85
TUBB6-202ENST00000417736 CEP162Q5TB80 1403 aa39.04■■■■□ 3.84
TUBB6-202ENST00000417736 PRXQ9BXM0 1461 aa39.04■■■■□ 3.84
TUBB6-202ENST00000417736 RAD54L2Q9Y4B4 1467 aa39.04■■■■□ 3.84
TUBB6-202ENST00000417736 ERICH3Q5RHP9 1530 aa38.97■■■■□ 3.83
TUBB6-202ENST00000417736 ABCA10Q8WWZ4 1543 aa38.97■■■■□ 3.83
TUBB6-202ENST00000417736 IGF1RP08069 1367 aa38.91■■■■□ 3.82
TUBB6-202ENST00000417736 MRC2Q9UBG0 1479 aa38.89■■■■□ 3.82
TUBB6-202ENST00000417736 WDR97A6NE52 1622 aa38.81■■■■□ 3.8
TUBB6-202ENST00000417736 CARMIL1Q5VZK9 1371 aa38.73■■■■□ 3.79
TUBB6-202ENST00000417736 ERCC6Q03468 1493 aa38.71■■■■□ 3.79
TUBB6-202ENST00000417736 CLIP1P30622 1438 aa38.7■■■■□ 3.79
TUBB6-202ENST00000417736 TARBP1Q13395 1621 aaKnown RBP38.67■■■■□ 3.78
TUBB6-202ENST00000417736 WDR62O43379 1518 aa38.66■■■■□ 3.78
TUBB6-202ENST00000417736 TDRD9Q8NDG6 1382 aaKnown RBP38.64■■■■□ 3.78
TUBB6-202ENST00000417736 ABCA5Q8WWZ7 1642 aa38.64■■■■□ 3.78
TUBB6-202ENST00000417736 PCGF6Q9BYE7 350 aa38.63■■■■□ 3.77
TUBB6-202ENST00000417736 GAPVD1Q14C86 1478 aa38.57■■■■□ 3.77
TUBB6-202ENST00000417736 RANGAP1P46060 587 aaPredicted RBP38.55■■■■□ 3.76
TUBB6-202ENST00000417736 CUL7Q14999 1698 aa38.54■■■■□ 3.76
TUBB6-202ENST00000417736 TRIM26Q12899 539 aaPredicted RBP38.53■■■■□ 3.76
TUBB6-202ENST00000417736 THOC2Q8NI27 1593 aaKnown RBP38.51■■■■□ 3.76
TUBB6-202ENST00000417736 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
TUBB6-202ENST00000417736 PPARGC1BQ86YN6 1023 aaKnown RBP38.41■■■■□ 3.74
TUBB6-202ENST00000417736 VPS8Q8N3P4 1428 aa38.37■■■■□ 3.73
TUBB6-202ENST00000417736 AQRO60306 1485 aaKnown RBP eCLIP38.35■■■■□ 3.732e-6■■■□□ 15.6
TUBB6-202ENST00000417736 PBRM1Q86U86 1689 aa38.33■■■■□ 3.73
TUBB6-202ENST00000417736 ARAP1Q96P48 1450 aa38.29■■■■□ 3.72
TUBB6-202ENST00000417736 ZNF608Q9ULD9 1512 aaPredicted RBP38.29■■■■□ 3.72
TUBB6-202ENST00000417736 ARHGAP35Q9NRY4 1499 aa38.24■■■■□ 3.71
TUBB6-202ENST00000417736 GRIN2BQ13224 1484 aa38.22■■■■□ 3.71
TUBB6-202ENST00000417736 CTTNBP2Q8WZ74 1663 aa38.17■■■■□ 3.7
TUBB6-202ENST00000417736 FHAD1B1AJZ9 1412 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms