RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
VNN3-205ENST00000417437 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
VNN3-205ENST00000417437 ABCC9O60706 1549 aa14.5□□□□□ -0.09
VNN3-205ENST00000417437 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
VNN3-205ENST00000417437 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
VNN3-205ENST00000417437 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
VNN3-205ENST00000417437 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
VNN3-205ENST00000417437 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
VNN3-205ENST00000417437 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
VNN3-205ENST00000417437 NACADO15069 1562 aa13.48□□□□□ -0.25
VNN3-205ENST00000417437 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
VNN3-205ENST00000417437 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
VNN3-205ENST00000417437 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
VNN3-205ENST00000417437 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
VNN3-205ENST00000417437 CECR2Q9BXF3 1484 aa13.08□□□□□ -0.32
VNN3-205ENST00000417437 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
VNN3-205ENST00000417437 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
VNN3-205ENST00000417437 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
VNN3-205ENST00000417437 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
VNN3-205ENST00000417437 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
VNN3-205ENST00000417437 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
VNN3-205ENST00000417437 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
VNN3-205ENST00000417437 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
VNN3-205ENST00000417437 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
VNN3-205ENST00000417437 CUX2O14529 1486 aa12.58□□□□□ -0.4
VNN3-205ENST00000417437 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
VNN3-205ENST00000417437 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
VNN3-205ENST00000417437 FOXD1Q16676 465 aa12.4□□□□□ -0.42
VNN3-205ENST00000417437 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
VNN3-205ENST00000417437 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
VNN3-205ENST00000417437 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
VNN3-205ENST00000417437 NESP48681 1621 aa12.33□□□□□ -0.43
VNN3-205ENST00000417437 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
VNN3-205ENST00000417437 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
VNN3-205ENST00000417437 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
VNN3-205ENST00000417437 THOC2Q8NI27 1593 aaKnown RBP12.24□□□□□ -0.45
VNN3-205ENST00000417437 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
VNN3-205ENST00000417437 KIF21AQ7Z4S6 1674 aa12.21□□□□□ -0.45
VNN3-205ENST00000417437 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
VNN3-205ENST00000417437 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
VNN3-205ENST00000417437 PEG3Q9GZU2 1588 aa12.1□□□□□ -0.47
VNN3-205ENST00000417437 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
VNN3-205ENST00000417437 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
VNN3-205ENST00000417437 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
VNN3-205ENST00000417437 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
VNN3-205ENST00000417437 WDR62O43379 1518 aa12.01□□□□□ -0.49
VNN3-205ENST00000417437 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
VNN3-205ENST00000417437 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
VNN3-205ENST00000417437 WIZO95785 1651 aa11.94□□□□□ -0.5
VNN3-205ENST00000417437 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
VNN3-205ENST00000417437 CFTRP13569 1480 aa11.83□□□□□ -0.52
VNN3-205ENST00000417437 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
VNN3-205ENST00000417437 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
VNN3-205ENST00000417437 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
VNN3-205ENST00000417437 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
VNN3-205ENST00000417437 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
VNN3-205ENST00000417437 MSH5O43196 834 aa11.76□□□□□ -0.53
VNN3-205ENST00000417437 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
VNN3-205ENST00000417437 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
VNN3-205ENST00000417437 FBLN2P98095 1184 aa11.73□□□□□ -0.53
VNN3-205ENST00000417437 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
VNN3-205ENST00000417437 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
VNN3-205ENST00000417437 CHD1O14646 1710 aa11.68□□□□□ -0.54
VNN3-205ENST00000417437 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
VNN3-205ENST00000417437 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
VNN3-205ENST00000417437 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
VNN3-205ENST00000417437 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
VNN3-205ENST00000417437 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
VNN3-205ENST00000417437 ARAP1Q96P48 1450 aa11.61□□□□□ -0.55
VNN3-205ENST00000417437 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
VNN3-205ENST00000417437 CHMP7Q8WUX9 453 aaPredicted RBP11.55□□□□□ -0.56
VNN3-205ENST00000417437 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
VNN3-205ENST00000417437 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
VNN3-205ENST00000417437 SOGA1O94964 1423 aa11.52□□□□□ -0.57
VNN3-205ENST00000417437 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
VNN3-205ENST00000417437 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
VNN3-205ENST00000417437 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
VNN3-205ENST00000417437 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
VNN3-205ENST00000417437 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
VNN3-205ENST00000417437 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
VNN3-205ENST00000417437 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
VNN3-205ENST00000417437 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
VNN3-205ENST00000417437 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
VNN3-205ENST00000417437 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
VNN3-205ENST00000417437 GRIN2BQ13224 1484 aa11.42□□□□□ -0.58
VNN3-205ENST00000417437 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
VNN3-205ENST00000417437 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
VNN3-205ENST00000417437 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
VNN3-205ENST00000417437 CUX1P39880 1505 aa11.34□□□□□ -0.59
VNN3-205ENST00000417437 ERCC6L2Q5T890 1561 aa11.27□□□□□ -0.61
VNN3-205ENST00000417437 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
VNN3-205ENST00000417437 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
VNN3-205ENST00000417437 CEP170Q5SW79 1584 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 ABCA5Q8WWZ7 1642 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
VNN3-205ENST00000417437 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
VNN3-205ENST00000417437 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
VNN3-205ENST00000417437 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms