RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 NISCHQ9Y2I1 1504 aa43.1■■■■■ 4.49
RAB3IP-205ENST00000417413 CCDC180Q9P1Z9 1646 aa37.47■■■■□ 3.59
RAB3IP-205ENST00000417413 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.39
RAB3IP-205ENST00000417413 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
RAB3IP-205ENST00000417413 ABCC9O60706 1549 aa35.59■■■■□ 3.29
RAB3IP-205ENST00000417413 DCAF8L2P0C7V8 631 aa35.42■■■■□ 3.26
RAB3IP-205ENST00000417413 SHROOM4Q9ULL8 1493 aa35.32■■■■□ 3.25
RAB3IP-205ENST00000417413 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
RAB3IP-205ENST00000417413 NACADO15069 1562 aa34.95■■■■□ 3.19
RAB3IP-205ENST00000417413 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
RAB3IP-205ENST00000417413 SCRIBQ14160 1630 aa34.49■■■■□ 3.11
RAB3IP-205ENST00000417413 SUPT5HO00267 1087 aaKnown RBP34.1■■■■□ 3.05
RAB3IP-205ENST00000417413 UNC13AQ9UPW8 1703 aa33.89■■■■□ 3.02
RAB3IP-205ENST00000417413 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
RAB3IP-205ENST00000417413 PABPN1Q86U42 306 aaKnown RBP eCLIP33.5■■■□□ 2.95
RAB3IP-205ENST00000417413 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
RAB3IP-205ENST00000417413 CECR2Q9BXF3 1484 aa33.49■■■□□ 2.95
RAB3IP-205ENST00000417413 MROH2BQ7Z745 1585 aa33.33■■■□□ 2.93
RAB3IP-205ENST00000417413 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
RAB3IP-205ENST00000417413 WIZO95785 1651 aa33.1■■■□□ 2.89
RAB3IP-205ENST00000417413 SMARCA4P51532 1647 aa33.09■■■□□ 2.89
RAB3IP-205ENST00000417413 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
RAB3IP-205ENST00000417413 TOP2AP11388 1531 aaKnown RBP32.71■■■□□ 2.83
RAB3IP-205ENST00000417413 PEG3Q9GZU2 1588 aa32.67■■■□□ 2.82
RAB3IP-205ENST00000417413 EIF4G1Q04637 1599 aaKnown RBP32.61■■■□□ 2.81
RAB3IP-205ENST00000417413 SMARCA2P51531 1590 aa32.46■■■□□ 2.79
RAB3IP-205ENST00000417413 ATAD2BQ9ULI0 1458 aa32.45■■■□□ 2.79
RAB3IP-205ENST00000417413 CCDC88BA6NC98 1476 aa32.39■■■□□ 2.78
RAB3IP-205ENST00000417413 NCAPD3P42695 1498 aa32.26■■■□□ 2.76
RAB3IP-205ENST00000417413 BAZ1BQ9UIG0 1483 aaKnown RBP32.26■■■□□ 2.75
RAB3IP-205ENST00000417413 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
RAB3IP-205ENST00000417413 HMGXB3Q12766 1538 aa32.16■■■□□ 2.74
RAB3IP-205ENST00000417413 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
RAB3IP-205ENST00000417413 ABCC8Q09428 1581 aa31.82■■■□□ 2.68
RAB3IP-205ENST00000417413 DNAJC5BQ9UF47 199 aa31.63■■■□□ 2.65
RAB3IP-205ENST00000417413 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
RAB3IP-205ENST00000417413 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
RAB3IP-205ENST00000417413 CFTRP13569 1480 aa31.48■■■□□ 2.63
RAB3IP-205ENST00000417413 FAM9AQ8IZU1 332 aaPredicted RBP31.46■■■□□ 2.63
RAB3IP-205ENST00000417413 SYNJ1O43426 1573 aa31.45■■■□□ 2.62
RAB3IP-205ENST00000417413 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
RAB3IP-205ENST00000417413 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
RAB3IP-205ENST00000417413 TOP2BQ02880 1626 aa31.29■■■□□ 2.6
RAB3IP-205ENST00000417413 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
RAB3IP-205ENST00000417413 SOGA1O94964 1423 aa31.25■■■□□ 2.59
RAB3IP-205ENST00000417413 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.59
RAB3IP-205ENST00000417413 EEA1Q15075 1411 aa31.2■■■□□ 2.58
RAB3IP-205ENST00000417413 RUSC2Q8N2Y8 1516 aa31.16■■■□□ 2.58
RAB3IP-205ENST00000417413 CUX1P39880 1505 aa31.15■■■□□ 2.58
RAB3IP-205ENST00000417413 PDS5BQ9NTI5 1447 aa31.07■■■□□ 2.56
RAB3IP-205ENST00000417413 NESP48681 1621 aa31.06■■■□□ 2.56
RAB3IP-205ENST00000417413 FANCD2Q9BXW9 1451 aa31.03■■■□□ 2.56
RAB3IP-205ENST00000417413 CSRNP3Q8WYN3 585 aa31.02■■■□□ 2.56
RAB3IP-205ENST00000417413 EHMT2Q96KQ7 1210 aa31.01■■■□□ 2.55
RAB3IP-205ENST00000417413 CEP164Q9UPV0 1460 aa30.89■■■□□ 2.54
RAB3IP-205ENST00000417413 KIF21BO75037 1637 aa30.84■■■□□ 2.53
RAB3IP-205ENST00000417413 GOLGA3Q08378 1498 aa30.8■■■□□ 2.52
RAB3IP-205ENST00000417413 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
RAB3IP-205ENST00000417413 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
RAB3IP-205ENST00000417413 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
RAB3IP-205ENST00000417413 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
RAB3IP-205ENST00000417413 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
RAB3IP-205ENST00000417413 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
RAB3IP-205ENST00000417413 KIF21AQ7Z4S6 1674 aa30.65■■■□□ 2.5
RAB3IP-205ENST00000417413 CEP162Q5TB80 1403 aa30.62■■■□□ 2.49
RAB3IP-205ENST00000417413 MRC2Q9UBG0 1479 aa30.61■■■□□ 2.49
RAB3IP-205ENST00000417413 UBTFP17480 764 aaKnown RBP30.61■■■□□ 2.49
RAB3IP-205ENST00000417413 URB2Q14146 1524 aaKnown RBP30.6■■■□□ 2.49
RAB3IP-205ENST00000417413 RAPGEF2Q9Y4G8 1499 aa30.6■■■□□ 2.49
RAB3IP-205ENST00000417413 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
RAB3IP-205ENST00000417413 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.48
RAB3IP-205ENST00000417413 CUX2O14529 1486 aa30.57■■■□□ 2.48
RAB3IP-205ENST00000417413 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
RAB3IP-205ENST00000417413 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
RAB3IP-205ENST00000417413 RAD54L2Q9Y4B4 1467 aa30.46■■■□□ 2.47
RAB3IP-205ENST00000417413 IGF1RP08069 1367 aa30.43■■■□□ 2.46
RAB3IP-205ENST00000417413 WDR97A6NE52 1622 aa30.41■■■□□ 2.46
RAB3IP-205ENST00000417413 WDR62O43379 1518 aa30.41■■■□□ 2.46
RAB3IP-205ENST00000417413 PCGF6Q9BYE7 350 aa30.38■■■□□ 2.45
RAB3IP-205ENST00000417413 TRIM26Q12899 539 aaPredicted RBP30.32■■■□□ 2.44
RAB3IP-205ENST00000417413 CLIP1P30622 1438 aa30.31■■■□□ 2.44
RAB3IP-205ENST00000417413 THOC2Q8NI27 1593 aaKnown RBP30.3■■■□□ 2.44
RAB3IP-205ENST00000417413 CARMIL1Q5VZK9 1371 aa30.26■■■□□ 2.43
RAB3IP-205ENST00000417413 TARBP1Q13395 1621 aaKnown RBP30.24■■■□□ 2.43
RAB3IP-205ENST00000417413 ABCA5Q8WWZ7 1642 aa30.23■■■□□ 2.43
RAB3IP-205ENST00000417413 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
RAB3IP-205ENST00000417413 CUL7Q14999 1698 aa30.18■■■□□ 2.42
RAB3IP-205ENST00000417413 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
RAB3IP-205ENST00000417413 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
RAB3IP-205ENST00000417413 VPS8Q8N3P4 1428 aa30.1■■■□□ 2.41
RAB3IP-205ENST00000417413 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
RAB3IP-205ENST00000417413 RANGAP1P46060 587 aaPredicted RBP30.04■■■□□ 2.4
RAB3IP-205ENST00000417413 ARAP1Q96P48 1450 aa30.03■■■□□ 2.4
RAB3IP-205ENST00000417413 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
RAB3IP-205ENST00000417413 ARHGAP35Q9NRY4 1499 aa29.96■■■□□ 2.39
RAB3IP-205ENST00000417413 CTTNBP2Q8WZ74 1663 aa29.93■■■□□ 2.38
RAB3IP-205ENST00000417413 AQRO60306 1485 aaKnown RBP eCLIP29.92■■■□□ 2.38
RAB3IP-205ENST00000417413 GRIN2BQ13224 1484 aa29.9■■■□□ 2.38
RAB3IP-205ENST00000417413 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
RAB3IP-205ENST00000417413 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms