RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
AP001042.1-201ENST00000416842 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
AP001042.1-201ENST00000416842 ABCC9O60706 1549 aa17.51■□□□□ 0.39
AP001042.1-201ENST00000416842 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
AP001042.1-201ENST00000416842 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
AP001042.1-201ENST00000416842 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
AP001042.1-201ENST00000416842 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
AP001042.1-201ENST00000416842 NACADO15069 1562 aa16.27■□□□□ 0.2
AP001042.1-201ENST00000416842 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
AP001042.1-201ENST00000416842 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
AP001042.1-201ENST00000416842 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
AP001042.1-201ENST00000416842 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
AP001042.1-201ENST00000416842 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
AP001042.1-201ENST00000416842 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
AP001042.1-201ENST00000416842 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
AP001042.1-201ENST00000416842 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
AP001042.1-201ENST00000416842 DNAJC5Q9H3Z4 198 aa15.69■□□□□ 0.1
AP001042.1-201ENST00000416842 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
AP001042.1-201ENST00000416842 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
AP001042.1-201ENST00000416842 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
AP001042.1-201ENST00000416842 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
AP001042.1-201ENST00000416842 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
AP001042.1-201ENST00000416842 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
AP001042.1-201ENST00000416842 CUX2O14529 1486 aa15.25■□□□□ 0.03
AP001042.1-201ENST00000416842 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
AP001042.1-201ENST00000416842 NCAPD3P42695 1498 aa15□□□□□ -0.01
AP001042.1-201ENST00000416842 NESP48681 1621 aa14.94□□□□□ -0.02
AP001042.1-201ENST00000416842 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
AP001042.1-201ENST00000416842 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
AP001042.1-201ENST00000416842 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
AP001042.1-201ENST00000416842 SMARCA2P51531 1590 aa14.85□□□□□ -0.03
AP001042.1-201ENST00000416842 SMARCA4P51532 1647 aa14.83□□□□□ -0.04
AP001042.1-201ENST00000416842 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
AP001042.1-201ENST00000416842 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
AP001042.1-201ENST00000416842 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
AP001042.1-201ENST00000416842 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
AP001042.1-201ENST00000416842 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
AP001042.1-201ENST00000416842 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
AP001042.1-201ENST00000416842 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
AP001042.1-201ENST00000416842 WDR62O43379 1518 aa14.57□□□□□ -0.08
AP001042.1-201ENST00000416842 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
AP001042.1-201ENST00000416842 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
AP001042.1-201ENST00000416842 FOXD1Q16676 465 aa14.53□□□□□ -0.08
AP001042.1-201ENST00000416842 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
AP001042.1-201ENST00000416842 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
AP001042.1-201ENST00000416842 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
AP001042.1-201ENST00000416842 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
AP001042.1-201ENST00000416842 RIMBP3CA6NJZ7 1639 aa14.39□□□□□ -0.11
AP001042.1-201ENST00000416842 RIMBP3BA6NNM3 1639 aa14.39□□□□□ -0.11
AP001042.1-201ENST00000416842 RIMBP3Q9UFD9 1639 aa14.39□□□□□ -0.11
AP001042.1-201ENST00000416842 WIZO95785 1651 aa14.38□□□□□ -0.11
AP001042.1-201ENST00000416842 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
AP001042.1-201ENST00000416842 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
AP001042.1-201ENST00000416842 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
AP001042.1-201ENST00000416842 CFTRP13569 1480 aa14.28□□□□□ -0.12
AP001042.1-201ENST00000416842 ARHGEF11O15085 1522 aa14.27□□□□□ -0.12
AP001042.1-201ENST00000416842 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
AP001042.1-201ENST00000416842 ZNF608Q9ULD9 1512 aaPredicted RBP14.19□□□□□ -0.14
AP001042.1-201ENST00000416842 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
AP001042.1-201ENST00000416842 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
AP001042.1-201ENST00000416842 CHD1O14646 1710 aa14.14□□□□□ -0.15
AP001042.1-201ENST00000416842 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
AP001042.1-201ENST00000416842 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
AP001042.1-201ENST00000416842 EIF4G3O43432 1585 aaKnown RBP14.12□□□□□ -0.15
AP001042.1-201ENST00000416842 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
AP001042.1-201ENST00000416842 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
AP001042.1-201ENST00000416842 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
AP001042.1-201ENST00000416842 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
AP001042.1-201ENST00000416842 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
AP001042.1-201ENST00000416842 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
AP001042.1-201ENST00000416842 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
AP001042.1-201ENST00000416842 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
AP001042.1-201ENST00000416842 FBLN2P98095 1184 aa13.93□□□□□ -0.18
AP001042.1-201ENST00000416842 CLASP1Q7Z460 1538 aa13.91□□□□□ -0.18
AP001042.1-201ENST00000416842 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
AP001042.1-201ENST00000416842 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
AP001042.1-201ENST00000416842 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
AP001042.1-201ENST00000416842 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
AP001042.1-201ENST00000416842 MSH5O43196 834 aa13.83□□□□□ -0.2
AP001042.1-201ENST00000416842 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
AP001042.1-201ENST00000416842 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
AP001042.1-201ENST00000416842 SOGA1O94964 1423 aa13.79□□□□□ -0.2
AP001042.1-201ENST00000416842 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
AP001042.1-201ENST00000416842 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
AP001042.1-201ENST00000416842 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
AP001042.1-201ENST00000416842 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
AP001042.1-201ENST00000416842 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
AP001042.1-201ENST00000416842 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
AP001042.1-201ENST00000416842 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
AP001042.1-201ENST00000416842 CUX1P39880 1505 aa13.69□□□□□ -0.22
AP001042.1-201ENST00000416842 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
AP001042.1-201ENST00000416842 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
AP001042.1-201ENST00000416842 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
AP001042.1-201ENST00000416842 CEP170Q5SW79 1584 aa13.6□□□□□ -0.23
AP001042.1-201ENST00000416842 SHROOM2Q13796 1616 aa13.57□□□□□ -0.24
AP001042.1-201ENST00000416842 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
AP001042.1-201ENST00000416842 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
AP001042.1-201ENST00000416842 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
AP001042.1-201ENST00000416842 NUP160Q12769 1436 aa13.54□□□□□ -0.24
AP001042.1-201ENST00000416842 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms