RNA–Protein interactions for RNA: ENST00000416722.1

LINC00316-201, long intergenic non-protein coding RNA 316, humanhuman

TSL 2 BASIC

Gene LINC00316, Length 455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00316-201ENST00000416722 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
LINC00316-201ENST00000416722 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
LINC00316-201ENST00000416722 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
LINC00316-201ENST00000416722 ABCC9O60706 1549 aa19.05■□□□□ 0.64
LINC00316-201ENST00000416722 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
LINC00316-201ENST00000416722 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.49
LINC00316-201ENST00000416722 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
LINC00316-201ENST00000416722 NACADO15069 1562 aa17.98■□□□□ 0.47
LINC00316-201ENST00000416722 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
LINC00316-201ENST00000416722 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
LINC00316-201ENST00000416722 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
LINC00316-201ENST00000416722 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
LINC00316-201ENST00000416722 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
LINC00316-201ENST00000416722 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
LINC00316-201ENST00000416722 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
LINC00316-201ENST00000416722 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
LINC00316-201ENST00000416722 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
LINC00316-201ENST00000416722 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
LINC00316-201ENST00000416722 EIF4G1Q04637 1599 aaKnown RBP17.18■□□□□ 0.34
LINC00316-201ENST00000416722 SHROOM4Q9ULL8 1493 aa17.17■□□□□ 0.34
LINC00316-201ENST00000416722 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
LINC00316-201ENST00000416722 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
LINC00316-201ENST00000416722 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
LINC00316-201ENST00000416722 ATAD2BQ9ULI0 1458 aa16.66■□□□□ 0.26
LINC00316-201ENST00000416722 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
LINC00316-201ENST00000416722 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
LINC00316-201ENST00000416722 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
LINC00316-201ENST00000416722 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
LINC00316-201ENST00000416722 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
LINC00316-201ENST00000416722 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
LINC00316-201ENST00000416722 WIZO95785 1651 aa16.51■□□□□ 0.23
LINC00316-201ENST00000416722 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
LINC00316-201ENST00000416722 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
LINC00316-201ENST00000416722 NESP48681 1621 aa16.48■□□□□ 0.23
LINC00316-201ENST00000416722 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
LINC00316-201ENST00000416722 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
LINC00316-201ENST00000416722 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
LINC00316-201ENST00000416722 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
LINC00316-201ENST00000416722 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
LINC00316-201ENST00000416722 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
LINC00316-201ENST00000416722 CUX2O14529 1486 aa16.14■□□□□ 0.17
LINC00316-201ENST00000416722 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
LINC00316-201ENST00000416722 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
LINC00316-201ENST00000416722 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
LINC00316-201ENST00000416722 FOXD1Q16676 465 aa16.02■□□□□ 0.16
LINC00316-201ENST00000416722 CFTRP13569 1480 aa16■□□□□ 0.15
LINC00316-201ENST00000416722 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
LINC00316-201ENST00000416722 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
LINC00316-201ENST00000416722 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
LINC00316-201ENST00000416722 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
LINC00316-201ENST00000416722 WDR62O43379 1518 aa15.96■□□□□ 0.15
LINC00316-201ENST00000416722 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
LINC00316-201ENST00000416722 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
LINC00316-201ENST00000416722 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
LINC00316-201ENST00000416722 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
LINC00316-201ENST00000416722 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
LINC00316-201ENST00000416722 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
LINC00316-201ENST00000416722 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
LINC00316-201ENST00000416722 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
LINC00316-201ENST00000416722 CUX1P39880 1505 aa15.62■□□□□ 0.09
LINC00316-201ENST00000416722 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
LINC00316-201ENST00000416722 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
LINC00316-201ENST00000416722 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
LINC00316-201ENST00000416722 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00316-201ENST00000416722 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
LINC00316-201ENST00000416722 CHD1O14646 1710 aa15.54■□□□□ 0.08
LINC00316-201ENST00000416722 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
LINC00316-201ENST00000416722 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
LINC00316-201ENST00000416722 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
LINC00316-201ENST00000416722 SOGA1O94964 1423 aa15.47■□□□□ 0.07
LINC00316-201ENST00000416722 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
LINC00316-201ENST00000416722 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
LINC00316-201ENST00000416722 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
LINC00316-201ENST00000416722 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
LINC00316-201ENST00000416722 MSH5O43196 834 aa15.42■□□□□ 0.06
LINC00316-201ENST00000416722 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
LINC00316-201ENST00000416722 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
LINC00316-201ENST00000416722 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
LINC00316-201ENST00000416722 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
LINC00316-201ENST00000416722 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
LINC00316-201ENST00000416722 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
LINC00316-201ENST00000416722 FBLN2P98095 1184 aa15.37■□□□□ 0.05
LINC00316-201ENST00000416722 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
LINC00316-201ENST00000416722 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
LINC00316-201ENST00000416722 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
LINC00316-201ENST00000416722 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
LINC00316-201ENST00000416722 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
LINC00316-201ENST00000416722 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
LINC00316-201ENST00000416722 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
LINC00316-201ENST00000416722 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
LINC00316-201ENST00000416722 CLASP1Q7Z460 1538 aa15.25■□□□□ 0.03
LINC00316-201ENST00000416722 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
LINC00316-201ENST00000416722 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
LINC00316-201ENST00000416722 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
LINC00316-201ENST00000416722 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
LINC00316-201ENST00000416722 CEP170Q5SW79 1584 aa15.18■□□□□ 0.02
LINC00316-201ENST00000416722 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
LINC00316-201ENST00000416722 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
LINC00316-201ENST00000416722 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
LINC00316-201ENST00000416722 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms