RNA–Protein interactions for RNA: ENST00000416279.1

LINC01946-201, Transcript of long intergenic non-protein coding RNA 1946, humanhuman

TSL 5 BASIC

Gene LINC01946, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01946-201ENST00000416279 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
LINC01946-201ENST00000416279 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
LINC01946-201ENST00000416279 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
LINC01946-201ENST00000416279 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
LINC01946-201ENST00000416279 ABCC9O60706 1549 aa21.3■■□□□ 1
LINC01946-201ENST00000416279 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
LINC01946-201ENST00000416279 NACADO15069 1562 aa20.22■□□□□ 0.83
LINC01946-201ENST00000416279 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
LINC01946-201ENST00000416279 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
LINC01946-201ENST00000416279 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
LINC01946-201ENST00000416279 UNC13AQ9UPW8 1703 aa19.97■□□□□ 0.79
LINC01946-201ENST00000416279 ZCCHC6Q5VYS8 1495 aaKnown RBP19.97■□□□□ 0.79
LINC01946-201ENST00000416279 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC01946-201ENST00000416279 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
LINC01946-201ENST00000416279 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
LINC01946-201ENST00000416279 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
LINC01946-201ENST00000416279 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
LINC01946-201ENST00000416279 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
LINC01946-201ENST00000416279 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
LINC01946-201ENST00000416279 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
LINC01946-201ENST00000416279 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
LINC01946-201ENST00000416279 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
LINC01946-201ENST00000416279 SMARCA4P51532 1647 aa18.71■□□□□ 0.58
LINC01946-201ENST00000416279 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
LINC01946-201ENST00000416279 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
LINC01946-201ENST00000416279 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
LINC01946-201ENST00000416279 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
LINC01946-201ENST00000416279 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
LINC01946-201ENST00000416279 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
LINC01946-201ENST00000416279 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
LINC01946-201ENST00000416279 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
LINC01946-201ENST00000416279 NESP48681 1621 aa18.41■□□□□ 0.54
LINC01946-201ENST00000416279 WIZO95785 1651 aa18.34■□□□□ 0.53
LINC01946-201ENST00000416279 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
LINC01946-201ENST00000416279 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
LINC01946-201ENST00000416279 CUX2O14529 1486 aa18.24■□□□□ 0.51
LINC01946-201ENST00000416279 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
LINC01946-201ENST00000416279 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
LINC01946-201ENST00000416279 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
LINC01946-201ENST00000416279 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
LINC01946-201ENST00000416279 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
LINC01946-201ENST00000416279 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
LINC01946-201ENST00000416279 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
LINC01946-201ENST00000416279 CFTRP13569 1480 aa18■□□□□ 0.47
LINC01946-201ENST00000416279 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
LINC01946-201ENST00000416279 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
LINC01946-201ENST00000416279 WDR62O43379 1518 aa17.92■□□□□ 0.46
LINC01946-201ENST00000416279 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
LINC01946-201ENST00000416279 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
LINC01946-201ENST00000416279 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
LINC01946-201ENST00000416279 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
LINC01946-201ENST00000416279 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
LINC01946-201ENST00000416279 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
LINC01946-201ENST00000416279 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
LINC01946-201ENST00000416279 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
LINC01946-201ENST00000416279 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
LINC01946-201ENST00000416279 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
LINC01946-201ENST00000416279 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
LINC01946-201ENST00000416279 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
LINC01946-201ENST00000416279 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
LINC01946-201ENST00000416279 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
LINC01946-201ENST00000416279 CUX1P39880 1505 aa17.42■□□□□ 0.38
LINC01946-201ENST00000416279 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
LINC01946-201ENST00000416279 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01946-201ENST00000416279 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
LINC01946-201ENST00000416279 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
LINC01946-201ENST00000416279 SOGA1O94964 1423 aa17.35■□□□□ 0.37
LINC01946-201ENST00000416279 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
LINC01946-201ENST00000416279 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
LINC01946-201ENST00000416279 CHD1O14646 1710 aa17.27■□□□□ 0.36
LINC01946-201ENST00000416279 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
LINC01946-201ENST00000416279 FOXD1Q16676 465 aa17.26■□□□□ 0.35
LINC01946-201ENST00000416279 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
LINC01946-201ENST00000416279 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
LINC01946-201ENST00000416279 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
LINC01946-201ENST00000416279 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
LINC01946-201ENST00000416279 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
LINC01946-201ENST00000416279 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
LINC01946-201ENST00000416279 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
LINC01946-201ENST00000416279 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
LINC01946-201ENST00000416279 FBLN2P98095 1184 aa17.16■□□□□ 0.34
LINC01946-201ENST00000416279 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
LINC01946-201ENST00000416279 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
LINC01946-201ENST00000416279 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
LINC01946-201ENST00000416279 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
LINC01946-201ENST00000416279 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
LINC01946-201ENST00000416279 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
LINC01946-201ENST00000416279 PBRM1Q86U86 1689 aa17.12■□□□□ 0.33
LINC01946-201ENST00000416279 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
LINC01946-201ENST00000416279 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
LINC01946-201ENST00000416279 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
LINC01946-201ENST00000416279 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
LINC01946-201ENST00000416279 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
LINC01946-201ENST00000416279 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
LINC01946-201ENST00000416279 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
LINC01946-201ENST00000416279 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
LINC01946-201ENST00000416279 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
LINC01946-201ENST00000416279 NUP160Q12769 1436 aa16.94■□□□□ 0.3
LINC01946-201ENST00000416279 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
LINC01946-201ENST00000416279 ERCC6L2Q5T890 1561 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms