RNA–Protein interactions for RNA: ENST00000416179.1

AP001625.3-201, humanhuman

TSL 2 BASIC

Gene AP001625.3, Length 449 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001625.3-201ENST00000416179 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
AP001625.3-201ENST00000416179 ABCC9O60706 1549 aa26.42■■□□□ 1.82
AP001625.3-201ENST00000416179 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
AP001625.3-201ENST00000416179 RB1CC1Q8TDY2 1594 aa25.16■■□□□ 1.62
AP001625.3-201ENST00000416179 NACADO15069 1562 aa24.94■■□□□ 1.58
AP001625.3-201ENST00000416179 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
AP001625.3-201ENST00000416179 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
AP001625.3-201ENST00000416179 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
AP001625.3-201ENST00000416179 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
AP001625.3-201ENST00000416179 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
AP001625.3-201ENST00000416179 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
AP001625.3-201ENST00000416179 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
AP001625.3-201ENST00000416179 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
AP001625.3-201ENST00000416179 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
AP001625.3-201ENST00000416179 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
AP001625.3-201ENST00000416179 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
AP001625.3-201ENST00000416179 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
AP001625.3-201ENST00000416179 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
AP001625.3-201ENST00000416179 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
AP001625.3-201ENST00000416179 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
AP001625.3-201ENST00000416179 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
AP001625.3-201ENST00000416179 CUX2O14529 1486 aa22.91■■□□□ 1.26
AP001625.3-201ENST00000416179 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
AP001625.3-201ENST00000416179 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
AP001625.3-201ENST00000416179 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
AP001625.3-201ENST00000416179 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
AP001625.3-201ENST00000416179 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
AP001625.3-201ENST00000416179 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
AP001625.3-201ENST00000416179 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
AP001625.3-201ENST00000416179 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
AP001625.3-201ENST00000416179 NESP48681 1621 aa22.63■■□□□ 1.21
AP001625.3-201ENST00000416179 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
AP001625.3-201ENST00000416179 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
AP001625.3-201ENST00000416179 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
AP001625.3-201ENST00000416179 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
AP001625.3-201ENST00000416179 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.18
AP001625.3-201ENST00000416179 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
AP001625.3-201ENST00000416179 WIZO95785 1651 aa22.23■■□□□ 1.15
AP001625.3-201ENST00000416179 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
AP001625.3-201ENST00000416179 WDR62O43379 1518 aa22.16■■□□□ 1.14
AP001625.3-201ENST00000416179 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
AP001625.3-201ENST00000416179 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
AP001625.3-201ENST00000416179 CFTRP13569 1480 aa22■■□□□ 1.11
AP001625.3-201ENST00000416179 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
AP001625.3-201ENST00000416179 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
AP001625.3-201ENST00000416179 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
AP001625.3-201ENST00000416179 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
AP001625.3-201ENST00000416179 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
AP001625.3-201ENST00000416179 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
AP001625.3-201ENST00000416179 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
AP001625.3-201ENST00000416179 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
AP001625.3-201ENST00000416179 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
AP001625.3-201ENST00000416179 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
AP001625.3-201ENST00000416179 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
AP001625.3-201ENST00000416179 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
AP001625.3-201ENST00000416179 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
AP001625.3-201ENST00000416179 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
AP001625.3-201ENST00000416179 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
AP001625.3-201ENST00000416179 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
AP001625.3-201ENST00000416179 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
AP001625.3-201ENST00000416179 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
AP001625.3-201ENST00000416179 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
AP001625.3-201ENST00000416179 CHD1O14646 1710 aa21.38■■□□□ 1.01
AP001625.3-201ENST00000416179 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
AP001625.3-201ENST00000416179 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
AP001625.3-201ENST00000416179 FBLN2P98095 1184 aa21.28■■□□□ 1
AP001625.3-201ENST00000416179 WDR97A6NE52 1622 aa21.27■■□□□ 1
AP001625.3-201ENST00000416179 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
AP001625.3-201ENST00000416179 SOGA1O94964 1423 aa21.27■■□□□ 1
AP001625.3-201ENST00000416179 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
AP001625.3-201ENST00000416179 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
AP001625.3-201ENST00000416179 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
AP001625.3-201ENST00000416179 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
AP001625.3-201ENST00000416179 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
AP001625.3-201ENST00000416179 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
AP001625.3-201ENST00000416179 CUX1P39880 1505 aa21.14■□□□□ 0.98
AP001625.3-201ENST00000416179 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
AP001625.3-201ENST00000416179 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
AP001625.3-201ENST00000416179 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
AP001625.3-201ENST00000416179 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
AP001625.3-201ENST00000416179 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
AP001625.3-201ENST00000416179 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
AP001625.3-201ENST00000416179 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
AP001625.3-201ENST00000416179 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
AP001625.3-201ENST00000416179 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
AP001625.3-201ENST00000416179 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
AP001625.3-201ENST00000416179 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
AP001625.3-201ENST00000416179 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
AP001625.3-201ENST00000416179 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
AP001625.3-201ENST00000416179 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
AP001625.3-201ENST00000416179 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
AP001625.3-201ENST00000416179 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
AP001625.3-201ENST00000416179 NUP160Q12769 1436 aa20.77■□□□□ 0.91
AP001625.3-201ENST00000416179 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
AP001625.3-201ENST00000416179 FHAD1B1AJZ9 1412 aa20.75■□□□□ 0.91
AP001625.3-201ENST00000416179 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
AP001625.3-201ENST00000416179 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
AP001625.3-201ENST00000416179 ERCC6L2Q5T890 1561 aa20.72■□□□□ 0.91
AP001625.3-201ENST00000416179 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.88
AP001625.3-201ENST00000416179 JPH4Q96JJ6 628 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms